RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 SFTPA1Q8IWL2 248 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 CCDC33Q8N5R6 958 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 UBR7Q8N806 425 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 GAB3Q8WWW8 586 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 KAT5Q92993 513 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
LMCD1-205ENST00000454244 UBXN6Q9BZV1 441 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 PARD6AQ9NPB6 346 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 ARHGEF4Q9NR80 690 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 LSM7Q9UK45 103 aaKnown RBP11.33□□□□□ -0.6
LMCD1-205ENST00000454244 TSPAN16Q9UKR8 245 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 USP18Q9UMW8 372 aa11.33□□□□□ -0.6
LMCD1-205ENST00000454244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TULP2O00295 520 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 P4HA2O15460 535 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 GREM1O60565 184 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 RPP40O75818 363 aaKnown RBP11.32□□□□□ -0.6
LMCD1-205ENST00000454244 APBB3O95704 486 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 GNA14O95837 355 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 RETP07949 1114 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 VDRP11473 427 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TGM1P22735 817 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 GRIA2P42262 883 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 PLA2G4AP47712 749 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TKTL1P51854 596 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 BCAT1P54687 386 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 PDE4CQ08493 712 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 CETN1Q12798 172 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 EMC10Q5UCC4 262 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TMEM270Q6UE05 265 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 MIB1Q86YT6 1006 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 PPM1KQ8N3J5 372 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 FAM160A2Q8N612 972 aaPredicted RBP11.32□□□□□ -0.6
LMCD1-205ENST00000454244 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TRIML1Q8N9V2 468 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TSTD1Q8NFU3 115 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 LMO3Q8TAP4 145 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 NDRG1Q92597 394 aaKnown RBP11.32□□□□□ -0.6
LMCD1-205ENST00000454244 RMDN1Q96DB5 314 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 ULBP1Q9BZM6 244 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 CLIC5Q9NZA1 410 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 HESX1Q9UBX0 185 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
LMCD1-205ENST00000454244 TBC1D3BA6NDS4 549 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 O00370 1275 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 XPO1O14980 1071 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 TULP3O75386 442 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 STC2O76061 302 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 AFPP02771 609 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 HMBSP08397 361 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 CCDC192P0DO97 292 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 TIE1P35590 1138 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 YWHAGP61981 247 aaKnown RBP eCLIP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 MRPS21P82921 87 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 BST2Q10589 180 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 EFEMP1Q12805 493 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 TPGS1Q6ZTW0 290 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 RRAGAQ7L523 313 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 KBTBD6Q86V97 674 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 ARHGEF19Q8IW93 802 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 ARHGAP18Q8N392 663 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 PHTF2Q8N3S3 785 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 ZNF276Q8N554 614 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 TFAP2BQ92481 460 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 CDK5RAP1Q96SZ6 601 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 LRRC4Q9HBW1 653 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 DEC1Q9P2X7 70 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 MMP17Q9ULZ9 603 aa11.31□□□□□ -0.6
LMCD1-205ENST00000454244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 HELZP42694 1942 aaKnown RBP11.31□□□□□ -0.6
LMCD1-205ENST00000454244 A0A0A0MRY4 1105 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 NEDD8-MDP1E9PL57 170 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 RNF225M0QZC1 329 aaPredicted RBP11.3□□□□□ -0.6
LMCD1-205ENST00000454244 TRIM24O15164 1050 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
LMCD1-205ENST00000454244 ZBED1O96006 694 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 CALCAP01258 141 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 KLKB1P03952 638 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 PAEPP09466 180 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
LMCD1-205ENST00000454244 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms