RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 FAM95CA0A1B0GW59 222 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 SGK1O00141 431 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 CBX4O00257 560 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ZBTB5O15062 677 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 GSC2O15499 205 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 RNGTTO60942 597 aaKnown RBP5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 PPFIA2O75334 1257 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ALDH1A2O94788 518 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 CER1O95813 267 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 MYL4P12829 197 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ARSAP15289 507 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ADRA1BP35368 520 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 MLH1P40692 756 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 LSSP48449 732 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 MCM2P49736 904 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ACADVLP49748 655 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ETF1P62495 437 aaKnown RBP5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 AMPD2Q01433 879 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 PTH1RQ03431 593 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 DNAJC3Q13217 504 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 MTMR1Q13613 665 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 HSP90AA2PQ14568 343 aaPredicted RBP5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 CLCA4Q14CN2 919 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 TBR1Q16650 682 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 SEZ6Q53EL9 994 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 TMEM201Q5SNT2 666 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 IL27RAQ6UWB1 636 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 GAREM2Q75VX8 874 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 CEP57Q86XR8 500 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 LSMEM2Q8N112 164 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 IL17RCQ8NAC3 791 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ZNF512Q96ME7 567 aaPredicted RBP5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 GCOM2Q9BZD3 368 aaPredicted RBP5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 LY9Q9HBG7 655 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 IL1RAPL2Q9NP60 686 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 KCNH7Q9NS40 1196 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 AGPAT5Q9NUQ2 364 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 STOML1Q9UBI4 398 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 SUSD2Q9UGT4 822 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 NFE2L3Q9Y4A8 694 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 PCDHB1Q9Y5F3 818 aa5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 ARHGEF17Q96PE2 2063 aaPredicted RBP5.82□□□□□ -1.48
SBDSP1-204ENST00000453858 A0A087WZ62 844 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 PRAMEF27A3QJZ7 478 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 ZNF213O14771 459 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 PAPSS1O43252 624 aaPredicted RBP5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 RFPL3O75679 317 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 FAM155BO75949 473 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 MPOP05164 745 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 GNSP15586 552 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 GLDCP23378 1020 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 TMOD1P28289 359 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 MCM4P33991 863 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 UQCRFS1P47985 274 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 ROR1Q01973 937 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 ARID5AQ03989 594 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 SF3A1Q15459 793 aaKnown RBP5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 CCDC184Q52MB2 194 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 ASPRV1Q53RT3 343 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 FHL5Q5TD97 284 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 SLC6A19Q695T7 634 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 SWSAP1Q6NVH7 229 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 CDPF1Q6NVV7 123 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 USP17L6PQ6QN14 398 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 BEND4Q6ZU67 534 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 DGKHQ86XP1 1220 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 SFTPA1Q8IWL2 248 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 ENAHQ8N8S7 591 aaPredicted RBP5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 FBXO27Q8NI29 283 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 HMGB4Q8WW32 186 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 CD101Q93033 1021 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 VCPIP1Q96JH7 1222 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 CEP89Q96ST8 783 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 MAP7D2Q96T17 732 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 FDXACB1Q9BRP7 624 aaPredicted RBP5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 KCNF1Q9H3M0 494 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 SLITRK6Q9H5Y7 841 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 IFT122Q9HBG6 1241 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 CD248Q9HCU0 757 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 BRMS1Q9HCU9 246 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 ASAH2Q9NR71 780 aa5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 THG1LQ9NWX6 298 aaKnown RBP5.81□□□□□ -1.48
SBDSP1-204ENST00000453858 A0A087X0B3 334 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 A0A1W2PNU3 283 aaPredicted RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 PRRG1O14668 218 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 RNF113AO15541 343 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 LRIG2O94898 1065 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 HTR3BO95264 441 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 PGRP06401 933 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 NFICP08651 508 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 PARP1P09874 1014 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 ITGA4P13612 1032 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 ATF4P18848 351 aaPredicted RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 PLCG1P19174 1290 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 SFPQP23246 707 aaKnown RBP eCLIP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 YARSP54577 528 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 MRPS21P82921 87 aaKnown RBP5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 CDC42EP1Q00587 391 aa5.8□□□□□ -1.48
SBDSP1-204ENST00000453858 MESP2Q0VG99 397 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms