RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 GATA6Q92908 595 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 MTBPQ96DY7 904 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 FGD4Q96M96 766 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 TWNKQ96RR1 684 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 USP29Q9HBJ7 922 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 POPDC2Q9HBU9 364 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 SMYD2Q9NRG4 433 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 NDE1Q9NXR1 346 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 HMGXB4Q9UGU5 601 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 SLC7A8Q9UHI5 535 aa16.33■□□□□ 0.21
TRA2B-205ENST00000453386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.33■□□□□ 0.2
TRA2B-205ENST00000453386 PRPSAP2O60256 369 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 ZBED1O96006 694 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 PDGFRAP16234 1089 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 AP2B1P63010 937 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 CXCL9Q07325 125 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 SURF1Q15526 300 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 TRMT5Q32P41 509 aaKnown RBP16.33■□□□□ 0.2
TRA2B-205ENST00000453386 LRRC71Q8N4P6 559 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 KCNN1Q92952 543 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 GBP5Q96PP8 586 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 TEX13BQ9BXU2 312 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 C20orf27Q9GZN8 174 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 KLC2Q9H0B6 622 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
TRA2B-205ENST00000453386 PNPLA8Q9NP80 782 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 GPATCH2LQ9NWQ4 482 aa16.33■□□□□ 0.2
TRA2B-205ENST00000453386 MICAL2O94851 1124 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 SNUPNO95149 360 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 STAT5BP51692 787 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 CNTN2Q02246 1040 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 CWF19L1Q69YN2 538 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 CAND1Q86VP6 1230 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 TTLL6Q8N841 843 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 SIRPGQ9P1W8 387 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 MEI4A8MW99 385 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 AP1G2O75843 785 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 USP1O94782 785 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 TOP3BO95985 862 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 C1QAP02745 245 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 CSH1P0DML2 217 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 CSH2P0DML3 217 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ROR2Q01974 943 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 PTPN11Q06124 597 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 STX3Q13277 289 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 BIRC2Q13490 618 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 DNAL1Q4LDG9 190 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 FOXB2Q5VYV0 432 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 OR6B2Q6IFH4 312 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 GALNT15Q8N3T1 639 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 PLD5Q8N7P1 536 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 RXFP2Q8WXD0 754 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 HEXIM2Q96MH2 286 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 SMYD3Q9H7B4 428 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ZNF180Q9UJW8 692 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ARHGAP42A6NI28 874 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 TRDMT1O14717 391 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 APOEP02649 317 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ZNF143P52747 638 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 BCAR1P56945 870 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ACTR3P61158 418 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 DSG1Q02413 1049 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 LAMTOR4Q0VGL1 99 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 TRMT10BQ6PF06 316 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 SLC4A11Q8NBS3 891 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 ZBED3Q96IU2 234 aaPredicted RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 RNF157Q96PX1 679 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 PCYT2Q99447 389 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 APOL6Q9BWW8 343 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 TRIM4Q9C037 500 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 SDCBP2Q9H190 292 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 FZD1Q9UP38 647 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 HBS1LQ9Y450 684 aaKnown RBP16.32■□□□□ 0.2
TRA2B-205ENST00000453386 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
TRA2B-205ENST00000453386 HMGCRP04035 888 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 GPD1P21695 349 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 TNFAIP1Q13829 316 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 TARBP2Q15633 366 aaKnown RBP16.31■□□□□ 0.2
TRA2B-205ENST00000453386 TEX44Q53QW1 395 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 UNC5AQ6ZN44 842 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 MAP7D3Q8IWC1 876 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 MCRS1Q96EZ8 462 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 IFT43Q96FT9 208 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 CNPY3Q9BT09 278 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 CPSF2Q9P2I0 782 aaKnown RBP16.31■□□□□ 0.2
TRA2B-205ENST00000453386 CXCL8P10145 99 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 PRKCHP24723 683 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 ACAP1Q15027 740 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 MFN1Q8IWA4 741 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 CCDC106Q9BWC9 280 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 ELOVL4Q9GZR5 314 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 PLAC1Q9HBJ0 212 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 PPM1HQ9ULR3 514 aa16.31■□□□□ 0.2
TRA2B-205ENST00000453386 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms