RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 ENGASEQ8NFI3 743 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 RPLP0P6Q8NHW5 317 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 EZH1Q92800 747 aaPredicted RBP9.17□□□□□ -0.94
RFX3-209ENST00000451859 SECISBP2LQ93073 1101 aaKnown RBP9.17□□□□□ -0.94
RFX3-209ENST00000451859 CYFIP2Q96F07 1278 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ARID3AQ99856 593 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ZDHHC4Q9NPG8 344 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 HOOK1Q9UJC3 728 aaKnown RBP9.17□□□□□ -0.94
RFX3-209ENST00000451859 NUDT5Q9UKK9 219 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 USP18Q9UMW8 372 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 SH3BP1Q9Y3L3 701 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ADAMTS9Q9P2N4 1935 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 PLXND1Q9Y4D7 1925 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 BIN1O00499 593 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 MDM4O15151 490 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 STX10O60499 249 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 GADD45BO75293 160 aaPredicted RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 OLFM2O95897 454 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 TCF3P15923 654 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 PFKLP17858 780 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 ACO1P21399 889 aaKnown RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 OPRD1P41143 372 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 SMCPP49901 116 aaPredicted RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 SPEM2Q0P670 501 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 INCA1Q0VD86 236 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 LRMPQ12912 555 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 STIM1Q13586 685 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 DHCR24Q15392 516 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 CCDC40Q4G0X9 1142 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 CBWD6Q4V339 395 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 C2orf27AQ580R0 203 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 CBWD3Q5JTY5 395 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 CBWD5Q5RIA9 395 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 LONP2Q86WA8 852 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 TTC30AQ86WT1 665 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 SFTPA1Q8IWL2 248 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 SCUBE3Q8IX30 993 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 CCDC33Q8N5R6 958 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 NAT16Q8N8M0 369 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 FBXL13Q8NEE6 735 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 OVCA2Q8WZ82 227 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 WBP2Q969T9 261 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 RMDN1Q96DB5 314 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 GSDMAQ96QA5 445 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 HNRNPABQ99729 332 aaKnown RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 CYP3A43Q9HB55 503 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 RAB20Q9NX57 234 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 MAN1B1Q9UKM7 699 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 CTNND2Q9UQB3 1225 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 TNRC6BQ9UPQ9 1833 aaKnown RBP9.16□□□□□ -0.94
RFX3-209ENST00000451859 GON4LQ3T8J9 2241 aa9.16□□□□□ -0.94
RFX3-209ENST00000451859 SPTBN2O15020 2390 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 SLC9A3R1O14745 358 aaPredicted RBP9.15□□□□□ -0.94
RFX3-209ENST00000451859 PSMA7O14818 248 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 AXIN1O15169 862 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 TLR5O60602 858 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 ATG13O75143 517 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 CILPO75339 1184 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 PAPSS2O95340 614 aaPredicted RBP9.15□□□□□ -0.94
RFX3-209ENST00000451859 TBX18O95935 607 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 ADH1CP00326 375 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 CCDC192P0DO97 292 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 ADH5P11766 374 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 GTF2H1P32780 548 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 SLC6A11P48066 632 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 FKBP3Q00688 224 aaKnown RBP9.15□□□□□ -0.94
RFX3-209ENST00000451859 DMC1Q14565 340 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 CCDC6Q16204 474 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 GAB4Q2WGN9 574 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 ANO4Q32M45 955 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 LY6G5CQ5SRR4 150 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 WDR5BQ86VZ2 330 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 C12orf40Q86WS4 652 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 DDX42Q86XP3 938 aaKnown RBP eCLIP9.15□□□□□ -0.94
RFX3-209ENST00000451859 BBS7Q8IWZ6 715 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 TIGD1Q96MW7 591 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 DNAI2Q9GZS0 605 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 FBXO44Q9H4M3 255 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 NMUR1Q9HB89 426 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 CSNK1G1Q9HCP0 422 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 TLR8Q9NR97 1041 aaKnown RBP9.15□□□□□ -0.94
RFX3-209ENST00000451859 CISHQ9NSE2 258 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
RFX3-209ENST00000451859 NAGPAQ9UK23 515 aa9.15□□□□□ -0.94
RFX3-209ENST00000451859 DNAH14Q0VDD8 3507 aa9.15□□□□□ -0.95
RFX3-209ENST00000451859 A0A1W2PQH9 124 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 HHLA1C9JL84 531 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 SLC16A3O15427 465 aaKnown RBP9.14□□□□□ -0.95
RFX3-209ENST00000451859 RPP40O75818 363 aaKnown RBP9.14□□□□□ -0.95
RFX3-209ENST00000451859 HMBSP08397 361 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 ZDHHC11BP0C7U3 371 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 RARGP13631 454 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 CD19P15391 556 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 RPIAP49247 311 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 RAD23BP54727 409 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms