RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SHDQ96IW2 340 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 PCMTD1Q96MG8 357 aaPredicted RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 SPAG5Q96R06 1193 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 KLF16Q9BXK1 252 aaPredicted RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 FBXL21Q9UKT6 434 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 FAM86C2PA6NEL3 165 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 GREM1O60565 184 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 GFPT2O94808 682 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 TBX18O95935 607 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 RALAP11233 206 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 KRT9P35527 623 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 MSANTD2Q6P1R3 559 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 FMNL3Q8IVF7 1028 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 FBXL6Q8N531 539 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 OTUB2Q96DC9 234 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 HPS4Q9NQG7 708 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 GKN1Q9NS71 199 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 ABCC13Q9NSE7 274 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 OLA1Q9NTK5 396 aaKnown RBP15.06■□□□□ 0
COL3A1-203ENST00000450867 DNMT3LQ9UJW3 386 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 MUC6Q6W4X9 2439 aa15.06■□□□□ 0
COL3A1-203ENST00000450867 E5RJQ4 531 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 SLC9A3R1O14745 358 aaPredicted RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 PAPSS1O43252 624 aaPredicted RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 PDGFBP01127 241 aaPredicted RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 LTFP02788 710 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 LCP1P13796 627 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CLCN5P51795 746 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 UBASH3AP57075 661 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CDR2Q01850 454 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 EML3Q32P44 896 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 ITPRIPL2Q3MIP1 535 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 C10orf120Q5SQS8 335 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 BSPRYQ5W0U4 402 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CWF19L1Q69YN2 538 aaKnown RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 CC2D1AQ6P1N0 951 aaPredicted RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 C1orf228Q6PIY5 440 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 HTR3DQ70Z44 454 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 ZNF687Q8N1G0 1237 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 NDRG1Q92597 394 aaKnown RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 PBXIP1Q96AQ6 731 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 IQCDQ96DY2 449 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 ZFYVE19Q96K21 471 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 NOX5Q96PH1 765 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CPXM1Q96SM3 734 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 OSBPL6Q9BZF3 934 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 C8orf33Q9H7E9 229 aaPredicted RBP15.05■□□□□ -0
COL3A1-203ENST00000450867 HEBP1Q9NRV9 189 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 SMPD4Q9NXE4 827 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CFAP97Q9P2B7 532 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CA14Q9ULX7 337 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CEP83Q9Y592 693 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CACNA1HO95180 2353 aa15.05■□□□□ -0
COL3A1-203ENST00000450867 CYP1A1P04798 512 aaPredicted RBP15.04■□□□□ -0
COL3A1-203ENST00000450867 CHRNB2P17787 502 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 AOC1P19801 751 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 GABRB2P47870 512 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 SNX16P57768 344 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 NOMO3P69849 1222 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 FMO1Q01740 532 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 TNK2Q07912 1038 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 RUNX3Q13761 415 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 BTBD8Q5XKL5 378 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 CACNA2D4Q7Z3S7 1137 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 RALGPS2Q86X27 583 aaPredicted RBP15.04■□□□□ -0
COL3A1-203ENST00000450867 PASD1Q8IV76 773 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 SCUBE3Q8IX30 993 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 TMEM35BQ8NCS4 154 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 C1orf131Q8NDD1 294 aaKnown RBP15.04■□□□□ -0
COL3A1-203ENST00000450867 CSGALNACT1Q8TDX6 532 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 CLEC4CQ8WTT0 213 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 ATP2A3Q93084 1043 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 PPP1R13BQ96KQ4 1090 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 SYT11Q9BT88 431 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 TRIM62Q9BVG3 475 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 TBC1D17Q9HA65 648 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 ST7Q9NRC1 585 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 ASNSD1Q9NWL6 643 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 DUS2Q9NX74 493 aaKnown RBP15.04■□□□□ -0
COL3A1-203ENST00000450867 TBC1D14Q9P2M4 693 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 PIAS3Q9Y6X2 628 aa15.04■□□□□ -0
COL3A1-203ENST00000450867 ITIH6Q6UXX5 1313 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 A0A1W2PQJ5 194 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 KANSL1LA0AUZ9 987 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 MAN2B1O00754 1011 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 FYNP06241 537 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 GLI1P08151 1106 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 MMEP08473 750 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 FERP16591 822 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 SCNN1AP37088 669 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 IFNAR2P48551 515 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 COG7P83436 770 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 GOLGA8FQ08AF8 430 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 GOLGA8DPQ0D2H9 430 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 ASTLQ6HA08 431 aaPredicted RBP15.03■□□□□ -0
COL3A1-203ENST00000450867 TRIM72Q6ZMU5 477 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 Q6ZNB5 142 aa15.03■□□□□ -0
COL3A1-203ENST00000450867 TPRG1Q6ZUI0 275 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms