RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TTC16Q8NEE8 873 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 CPLX3Q8WVH0 158 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 IRF7Q92985 503 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 SLC22A12Q96S37 553 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 RPP25Q9BUL9 199 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 NMUR1Q9HB89 426 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 SEPT11Q9NVA2 429 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 AIPL1Q9NZN9 384 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 CAPN11Q9UMQ6 739 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 CPQQ9Y646 472 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 ZNF263O14978 683 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 TCF3P15923 654 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 FCHO2Q0JRZ9 810 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 GRM2Q14416 872 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 BSPRYQ5W0U4 402 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 TOGARAM2Q6ZUX3 1019 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 SCD5Q86SK9 330 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 ERICH1Q86X53 443 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 WDTC1Q8N5D0 677 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 FAM149B1Q96BN6 582 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 CPXM1Q96SM3 734 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 PLA2G2FQ9BZM2 168 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 CYTH4Q9UIA0 394 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 STRIP2Q9ULQ0 834 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 BZW2Q9Y6E2 419 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-209ENST00000447986 DOCK8Q8NF50 2099 aa13.71□□□□□ -0.21
ERGIC3-209ENST00000447986 YJEFN3A6XGL0 299 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 E7ENQ6 273 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 CAPN9O14815 690 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 CHADO15335 359 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 LTFP02788 710 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 GYPCP04921 128 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 GDI1P31150 447 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 ZXDAP98168 799 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 FMO1Q01740 532 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 TSR1Q2NL82 804 aaKnown RBP13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 IRF2BP2Q7Z5L9 587 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 VSTM4Q8IW00 320 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 SH3RF2Q8TEC5 729 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 SYN2Q92777 582 aaPredicted RBP13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 EDAQ92838 391 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 C18orf8Q96DM3 657 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 AGPAT1Q99943 283 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 SLC2A4RGQ9NR83 387 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 OSER1Q9NX31 292 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 SH3BP1Q9Y3L3 701 aa13.71□□□□□ -0.22
ERGIC3-209ENST00000447986 OBSL1O75147 1896 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 PI4K2BG5E9Z4 385 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 LEFTY2O00292 366 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 GPR37O15354 613 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 PAPSS1O43252 624 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 NARSO43776 548 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 CYP1A1P04798 512 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 TNFAIP3P21580 790 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 CASP14P31944 242 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 PRKCIP41743 596 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 NSFP46459 744 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 NOMO3P69849 1222 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 GPC5P78333 572 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 COG7P83436 770 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 USP4Q13107 963 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 MTF1Q14872 753 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 ZNF77Q15935 545 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 PTPN20Q4JDL3 420 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 NAA35Q5VZE5 725 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 OR6B2Q6IFH4 312 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 VPS36Q86VN1 386 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 KIAA1958Q8N8K9 716 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 NDRG1Q92597 394 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 POPDC2Q9HBU9 364 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 LSM7Q9UK45 103 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 ZNF638Q14966 1978 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 NUP210Q8TEM1 1887 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 MYO16Q9Y6X6 1858 aa13.7□□□□□ -0.22
ERGIC3-209ENST00000447986 DLL1O00548 723 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 GABBR2O75899 941 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 TBX18O95935 607 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 GLI1P08151 1106 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 NCAM1P13591 858 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 CHRNB2P17787 502 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 PGFP49763 221 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 YWHAZP63104 245 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 EFEMP1Q12805 493 aa13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 TDRD12Q587J7 1177 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-209ENST00000447986 BHLHA9Q7RTU4 235 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms