RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TRIM13O60858 407 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CRTAMO95727 393 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TUBA4AP68366 448 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ADAM17P78536 824 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 MTA1Q13330 715 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CYP51A1Q16850 503 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 BOLA3Q53S33 107 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 THNSL1Q8IYQ7 743 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PNMA5Q96PV4 448 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 SLC37A4O43826 429 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 GDF11O95390 407 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PSMB9P28065 219 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PTGES3LE9PB15 166 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 IST1P53990 364 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 BMPR2Q13873 1038 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 USP10Q14694 798 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 SEC23AQ15436 765 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 GLRA4Q5JXX5 417 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PSMA8Q8TAA3 256 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 RTKNQ9BST9 563 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SLC4A1P02730 911 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 BLVRAP53004 296 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SLC1A5Q15758 541 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SLC7A3Q8WY07 619 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CHST7Q9NS84 486 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 RTTNQ86VV8 2226 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PSMD11O00231 422 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TLR2O60603 784 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ARMCX4Q5H9R4 360 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CCDC81Q6ZN84 652 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 AHI1Q8N157 1196 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 LNPEPQ9UIQ6 1025 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 NRF1Q16656 503 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 GPAT2Q6NUI2 795 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 NOP9Q86U38 636 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 SNX31Q8N9S9 440 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 FNDC8Q8TC99 324 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 GRHL1Q9NZI5 618 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SPATA7Q9P0W8 599 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 SNPHO15079 494 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ETS1P14921 441 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TGM2P21980 687 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 FCHO2Q0JRZ9 810 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 WDR27A2RRH5 827 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 TBX3O15119 743 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PABPC4LP0CB38 370 aaKnown RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 CHRNB3Q05901 458 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 MAMLD1Q13495 774 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 C4orf22Q6V702 233 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 MTG1Q9BT17 334 aaPredicted RBP8.12□□□□□ -1.11
SMG1-202ENST00000446231 TASP1Q9H6P5 420 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 PCDH12Q9NPG4 1184 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ASXL3Q9C0F0 2248 aa8.12□□□□□ -1.11
SMG1-202ENST00000446231 ZMPSTE24O75844 475 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 NOL4O94818 638 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 LDLRP01130 860 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 CCNA2P20248 432 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 GTF2IP78347 998 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 TFDP3Q5H9I0 405 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 CRTC3Q6UUV7 619 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 CYP2R1Q6VVX0 501 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 COQ9O75208 318 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 C6orf10Q5SRN2 563 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 SCARA3Q6AZY7 606 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 NOL11Q9H8H0 719 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 C1QBPQ07021 282 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 FAM102AQ5T9C2 384 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 CYP4A22Q5TCH4 519 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 LRRC8DQ7L1W4 858 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 PDPK2PQ6A1A2 396 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 BDH2Q9BUT1 245 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 POLR3FQ9H1D9 316 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 PICK1Q9NRD5 415 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 FRMPD4Q14CM0 1322 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ABCC3O15438 1527 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 NPHP4O75161 1426 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 ECE2O60344 883 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 CSPG5O95196 566 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 DUOXA2Q1HG44 320 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 SLFN11Q7Z7L1 901 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 MCPH1Q8NEM0 835 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ZMYM2Q9UBW7 1377 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 SSTR1P30872 391 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 QARSP47897 775 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 SLC27A3Q5K4L6 730 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 STRA8Q7Z7C7 330 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 SKA2Q8WVK7 121 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 A0A1B0GVG6 124 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ZNF543Q08ER8 600 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 TBCELQ5QJ74 424 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ZNF677Q86XU0 584 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 XPNPEP3Q9NQH7 507 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 STMN3Q9NZ72 180 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms