RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 INSCQ1MX18 579 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 TMEM119Q4V9L6 283 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 RNASE12Q5GAN4 147 aaKnown RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 C3orf38Q5JPI3 329 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 CERCAMQ5T4B2 595 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 PAPD7Q5XG87 772 aaKnown RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 C11orf87Q6NUJ2 197 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 TRIM72Q6ZMU5 477 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 CATSPERGQ6ZRH7 1159 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 DEFB132Q7Z7B7 95 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 SKAP1Q86WV1 359 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 MPP5Q8N3R9 675 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 VGLL2Q8N8G2 317 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 TERB1Q8NA31 727 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 CYP2W1Q8TAV3 490 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 NAF1Q96HR8 494 aaKnown RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF778Q96MU6 729 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRR25Q96S07 402 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 MPHOSPH6Q99547 160 aaKnown RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 NUP62CLQ9H1M0 184 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 DHX36Q9H2U1 1008 aaKnown RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF287Q9HBT7 754 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF70Q9UC06 446 aaPredicted RBP4□□□□□ -1.77
HMGB3P12-201ENST00000438745 BTBD3Q9Y2F9 522 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 AGLP35573 1532 aa4□□□□□ -1.77
HMGB3P12-201ENST00000438745 NHSL1Q5SYE7 1610 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 A2ML1A8K2U0 1454 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 ATP10BO94823 1461 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 M0R3H8 397 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PMPCBO75439 489 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRR35P0CG20 571 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 SLC5A1P13866 664 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PHKG2P15735 406 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 UQCRC1P31930 480 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PIK3CBP42338 1070 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PRKAG1P54619 331 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 TPTEP56180 551 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 RHBDL3P58872 404 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 TIAL1Q01085 375 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 UBE4AQ14139 1066 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 BRD3Q15059 726 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF750Q32MQ0 723 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 CEP78Q5JTW2 689 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 NAPRTQ6XQN6 538 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 NEK8Q86SG6 692 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 RAB11FIP4Q86YS3 637 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 LIX1LQ8IVB5 337 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 C8orf58Q8NAV2 365 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 TMEM171Q8WVE6 324 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 RITA1Q96K30 269 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 MSLNLQ96KJ4 702 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PPP1R9BQ96SB3 815 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 GAR1Q9NY12 217 aaKnown RBP3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 DKK4Q9UBT3 224 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 AFF4Q9UHB7 1163 aaKnown RBP3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 CAPN11Q9UMQ6 739 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 PHTF1Q9UMS5 762 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF142P52746 1687 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 UGGT2Q9NYU1 1516 aa3.99□□□□□ -1.77
HMGB3P12-201ENST00000438745 LRRC9Q6ZRR7 1453 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 NEURL4Q96JN8 1562 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 BLMP54132 1417 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 FGD6Q6ZV73 1430 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 KIF27Q86VH2 1401 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 ROBO1Q9Y6N7 1651 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 LOC102723971A0A1B0GUV8 181 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 ANO9A1A5B4 782 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 WDR91A4D1P6 747 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 PLEKHD1A6NEE1 506 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 POC1B-GALNT4F8VUJ3 575 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 PPP6CO00743 305 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 CD3EAPO15446 510 aaKnown RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 PDE8BO95263 885 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 VNN1O95497 513 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 FGAP02671 866 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 KELP23276 732 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 KLRC1P26715 233 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 TIRAPP58753 221 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 E2F1Q01094 437 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 HDAC1Q13547 482 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 DAZAP2Q15038 168 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 EZH2Q15910 746 aaKnown RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 SRSF7Q16629 238 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 L1TD1Q5T7N2 865 aaKnown RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 FCRL6Q6DN72 434 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 KIRREL2Q6UWL6 708 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 GLCCI1Q86VQ1 547 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 SESTD1Q86VW0 696 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 SFTPA1Q8IWL2 248 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 SPARTQ8N0X7 666 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 GALNT16Q8N428 558 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 GALNT4Q8N4A0 578 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 SIRT6Q8N6T7 355 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 ZNF398Q8TD17 642 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 SCARB1Q8WTV0 552 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 DAZAP1Q96EP5 407 aaKnown RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 TNIP3Q96KP6 325 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 ASB2Q96Q27 587 aa3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 DPCDQ9BVM2 203 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P12-201ENST00000438745 QTRT1Q9BXR0 403 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms