RNA–Protein interactions for RNA: ENST00000438393.5

BRD1-204, Transcript of bromodomain containing 1, humanhuman

TSL 2

Gene BRD1, Length 3,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-204ENST00000438393 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
BRD1-204ENST00000438393 HAPLN3Q96S86 360 aa13.74□□□□□ -0.21
BRD1-204ENST00000438393 INTS2Q9H0H0 1204 aaKnown RBP13.74□□□□□ -0.21
BRD1-204ENST00000438393 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
BRD1-204ENST00000438393 ASIC3Q9UHC3 531 aa13.74□□□□□ -0.21
BRD1-204ENST00000438393 INPP5FQ9Y2H2 1132 aa13.74□□□□□ -0.21
BRD1-204ENST00000438393 COQ9O75208 318 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 PENKP01210 267 aaPredicted RBP13.73□□□□□ -0.21
BRD1-204ENST00000438393 STAG3L1P0CL83 205 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 PSMC2P35998 433 aaKnown RBP13.73□□□□□ -0.21
BRD1-204ENST00000438393 SPARCL1Q14515 664 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 GPNMBQ14956 572 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 TRAF7Q6Q0C0 670 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 UBN1Q9NPG3 1134 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 CHST7Q9NS84 486 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 ATXN10Q9UBB4 475 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 CREB3O43889 395 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 CCDC22O60826 627 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 LYNP07948 512 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 IMPDH2P12268 514 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 CAV1Q03135 178 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
BRD1-204ENST00000438393 BFSP2Q13515 415 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 TMED2Q15363 201 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 ARHGAP18Q8N392 663 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 LMO3Q8TAP4 145 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 BTBD6Q96KE9 485 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
BRD1-204ENST00000438393 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 SYNCQ9H7C4 482 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 CHD7Q9P2D1 2997 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 UBE4BO95155 1302 aa13.73□□□□□ -0.21
BRD1-204ENST00000438393 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 ZNF184Q99676 751 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 ARL8BQ9NVJ2 186 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 TNFSF13BQ9Y275 285 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 ZSCAN9O15535 394 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 RPA3P35244 121 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 LSAMPQ13449 338 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 MYBPC3Q14896 1274 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 NFIL3Q16649 462 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 ZPBP2Q6X784 338 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 SYDE1Q6ZW31 735 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 RBM12BQ8IXT5 1001 aaKnown RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 ZNF398Q8TD17 642 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 NFKBIZQ9BYH8 718 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 PTPRHQ9HD43 1115 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 ZNF212Q9UDV6 495 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 ANAPC5Q9UJX4 755 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 GPR182O15218 404 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 NEK3P51956 506 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 SGO2Q562F6 1265 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 C9orf72Q96LT7 481 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
BRD1-204ENST00000438393 KIAA1586Q9HCI6 787 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 IPPQ9Y573 584 aa13.72□□□□□ -0.21
BRD1-204ENST00000438393 TRIP11Q15643 1979 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 OGTO15294 1046 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
BRD1-204ENST00000438393 RECQL4O94761 1208 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 ABHD2P08910 425 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 UBTFL6P0CB48 400 aaPredicted RBP13.71□□□□□ -0.21
BRD1-204ENST00000438393 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 BFSP1Q12934 665 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 CCDC28BQ9BUN5 200 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 GOLGA2P5Q9HBQ8 144 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 TBX21Q9UL17 535 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
BRD1-204ENST00000438393 MAP3K7O43318 606 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 FAM163BP0C2L3 166 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 SPATA31D3P0C874 917 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 VAMP7P51809 220 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 CDC42EP1Q00587 391 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 POU5F1BQ06416 359 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 NR1H3Q13133 447 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 SPATA31D4Q6ZUB0 917 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.22
BRD1-204ENST00000438393 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.22
BRD1-204ENST00000438393 OR5B17Q8NGF7 314 aa13.71□□□□□ -0.22
BRD1-204ENST00000438393 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms