RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 CETN1Q12798 172 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 SIM2Q14190 667 aaPredicted RBP23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 LPAL2Q16609 132 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 GOLGA7BQ2TAP0 167 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 PRR23BQ6ZRT6 265 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 CAMKK1Q8N5S9 505 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 CCDC26Q8TAB7 109 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 USP33Q8TEY7 942 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 SECISBP2LQ93073 1101 aaKnown RBP23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 PNKPQ96T60 521 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 SPHK2Q9NRA0 654 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 CLIC5Q9NZA1 410 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 DNMT3LQ9UJW3 386 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 RAB23Q9ULC3 237 aa23.29■■□□□ 1.32
SEMA3B-205ENST00000434030 CCDC163A0A0D9SF12 145 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 TULP2O00295 520 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 VDRP11473 427 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 CD19P15391 556 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 PLA2G4AP47712 749 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 PDE4CQ08493 712 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 MESP2Q0VG99 397 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 C10orf120Q5SQS8 335 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 TMEM25Q86YD3 366 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 PPM1KQ8N3J5 372 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 EHBP1Q8NDI1 1231 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 ACDQ96AP0 544 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 KIAA1257Q9ULG3 409 aa23.28■■□□□ 1.32
SEMA3B-205ENST00000434030 SDK1Q7Z5N4 2213 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 A0A0A0MRY4 1105 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 XPO1O14980 1071 aaKnown RBP23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 RALAP11233 206 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 BCAT1P54687 386 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 SEC13P55735 322 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 GOLGA8FQ08AF8 430 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 GOLGA8DPQ0D2H9 430 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 DMC1Q14565 340 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 C2orf27AQ580R0 203 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 TMEM270Q6UE05 265 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 TADA2BQ86TJ2 420 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 SFTPA1Q8IWL2 248 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 KAT5Q92993 513 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 HHIPQ96QV1 700 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 HESX1Q9UBX0 185 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 RWDD2AQ9UIY3 292 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 PCDHB4Q9Y5E5 795 aa23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.27■■□□□ 1.32
SEMA3B-205ENST00000434030 RNF225M0QZC1 329 aaPredicted RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 HOXC11O43248 304 aaPredicted RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 KAT7O95251 611 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 FGFR1OPO95684 399 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 AFPP02771 609 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 APODP05090 189 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 PAEPP09466 180 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 CCDC192P0DO97 292 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 TKTL1P51854 596 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 BST2Q10589 180 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 PM20D1Q6GTS8 502 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 LAIR1Q6GTX8 287 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 RRAGAQ7L523 313 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 ETFBKMTQ8IXQ9 262 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 PHTF2Q8N3S3 785 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 NAT16Q8N8M0 369 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 UBA3Q8TBC4 463 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 MED15Q96RN5 788 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 CDK5RAP1Q96SZ6 601 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 ARHGEF4Q9NR80 690 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 LSM7Q9UK45 103 aaKnown RBP23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 GMEB2Q9UKD1 530 aa23.26■■□□□ 1.31
SEMA3B-205ENST00000434030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 O00370 1275 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 ZBED1O96006 694 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 GRIA2P42262 883 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 MRPS21P82921 87 aaKnown RBP23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 ANO4Q32M45 955 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 BTBD8Q5XKL5 378 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 ARHGEF19Q8IW93 802 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 ARHGAP18Q8N392 663 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 TFAP2BQ92481 460 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 ULBP1Q9BZM6 244 aa23.25■■□□□ 1.31
SEMA3B-205ENST00000434030 DMXL1Q9Y485 3027 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 STC2O76061 302 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 TGM1P22735 817 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 ANP32AP39687 249 aaKnown RBP23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 YWHAGP61981 247 aaKnown RBP eCLIP23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 GCNT1Q02742 428 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 KDSRQ06136 332 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 PKDCCQ504Y2 493 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 LCLAT1Q6UWP7 414 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 Q6ZNB5 142 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 CEP68Q76N32 757 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 MIB1Q86YT6 1006 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 GPR161Q8N6U8 529 aaKnown RBP23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 GAB3Q8WWW8 586 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 NDRG1Q92597 394 aaKnown RBP23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 LRRC4Q9HBW1 653 aa23.24■■□□□ 1.31
SEMA3B-205ENST00000434030 TULP3O75386 442 aa23.23■■□□□ 1.31
SEMA3B-205ENST00000434030 CHRM1P11229 460 aaPredicted RBP23.23■■□□□ 1.31
SEMA3B-205ENST00000434030 TNFRSF4P43489 277 aa23.23■■□□□ 1.31
SEMA3B-205ENST00000434030 ID4P47928 161 aa23.23■■□□□ 1.31
SEMA3B-205ENST00000434030 COG7P83436 770 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms