RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 VWA3BQ502W6 1294 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 DCAF6Q58WW2 860 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 VITQ6UXI7 678 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 FAM35AQ86V20 835 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 CEP120Q8N960 986 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ATP11CQ8NB49 1132 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TTC1Q99614 292 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SLC13A1Q9BZW2 595 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 NUP62CLQ9H1M0 184 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SUDS3Q9H7L9 328 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SGK2Q9HBY8 427 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 GTSE1Q9NYZ3 720 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ARHGAP26Q9UNA1 814 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 MAPK8IP1Q9UQF2 711 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 BCAT2O15382 392 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ADH1BP00325 375 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 F9P00740 461 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PRNPP04156 253 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF132P52740 706 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF268Q14587 947 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 DHCR24Q15392 516 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HADHQ16836 314 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 EFHC2Q5JST6 749 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 OTUD6BQ8N6M0 293 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SHKBP1Q8TBC3 707 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 FEM1CQ96JP0 617 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 MBOAT7Q96N66 472 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 EPAS1Q99814 870 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 CHST7Q9NS84 486 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 GJB4Q9NTQ9 266 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 RBM12Q9NTZ6 932 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 GULP1Q9UBP9 304 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 CCDC163A0A0D9SF12 145 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 AFPP02771 609 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SYT1P21579 422 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 DNAJB1P25685 340 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HOXC8P31273 242 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 LTBRP36941 435 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 NCKAP1LP55160 1127 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 UBXN11Q5T124 520 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 FAXCQ5TGI0 409 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TAS1R1Q7RTX1 841 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF720Q7Z2F6 126 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ATCAYQ86WG3 371 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TMEFF1Q8IYR6 380 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 AHI1Q8N157 1196 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PDCL2Q8N4E4 241 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PRSS33Q8NF86 280 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PPP1R10Q96QC0 940 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 DEPDC7Q96QD5 511 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 S1PR5Q9H228 398 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM8AQ9HCN3 771 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 AVENQ9NQS1 362 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HBS1LQ9Y450 684 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 FLRT2O43155 660 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GLP2RO95838 553 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SLC2A4P14672 509 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 WARSP23381 471 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GTF2H1P32780 548 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF235Q14590 738 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 TTC39BQ5VTQ0 682 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 C1orf186Q6ZWK4 172 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 OOSP2Q86WS3 158 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ZCCHC9Q8N567 271 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 FAM160A2Q8N612 972 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ALLCQ8N6M5 410 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SLC2A14Q8TDB8 520 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 TMC2Q8TDI7 906 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 USP13Q92995 863 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 KLHDC7BQ96G42 594 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 C8orf48Q96LL4 319 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 OLFML3Q9NRN5 406 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 MIOSQ9NXC5 875 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 LAMB1P07942 1786 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 MACROD2A1Z1Q3 448 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CPED1A4D0V7 1026 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 FPGTO14772 594 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SCAMP3O14828 347 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CBFA2T2O43439 604 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SOAT2O75908 522 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 U2AF2P26368 475 aaKnown RBP eCLIP4.79□□□□□ -1.645e-9■□□□□ 9.3
UBE4A-202ENST00000431736 SDC4P31431 198 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 INHBCP55103 352 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 EVCP57679 992 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 YWHAGP61981 247 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SATB1Q01826 763 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 LRRC63Q05C16 580 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF33AQ06730 810 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CYP24A1Q07973 514 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CCDC173Q0VFZ6 552 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 LY6G5CQ5SRR4 150 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 RD3Q7Z3Z2 195 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 FGF14Q92915 247 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CALN1Q9BXU9 219 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GMIPQ9P107 970 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CTNND2Q9UQB3 1225 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms