RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 NAT16Q8N8M0 369 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 CEP63Q96MT8 703 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 METTL14Q9HCE5 456 aaKnown RBP19.38■□□□□ 0.69
PSPC1-202ENST00000427943 ARHGEF4Q9NR80 690 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.38■□□□□ 0.69
PSPC1-202ENST00000427943 CCDC163A0A0D9SF12 145 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 PPP1R3GB7ZBB8 358 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 AXIN1O15169 862 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 GREM1O60565 184 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 APBB3O95704 486 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 STX17P56962 302 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 RSPO4Q2I0M5 234 aaPredicted RBP19.37■□□□□ 0.69
PSPC1-202ENST00000427943 ANO4Q32M45 955 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 C10orf120Q5SQS8 335 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 TTC30AQ86WT1 665 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 TMEM25Q86YD3 366 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 ZDHHC4Q9NPG8 344 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 SPHK2Q9NRA0 654 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 CIZ1Q9ULV3 898 aaPredicted RBP19.37■□□□□ 0.69
PSPC1-202ENST00000427943 NUP205Q92621 2012 aa19.37■□□□□ 0.69
PSPC1-202ENST00000427943 HOXC11O43248 304 aaPredicted RBP19.36■□□□□ 0.69
PSPC1-202ENST00000427943 CD19P15391 556 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 TIE1P35590 1138 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 GOLGA8FQ08AF8 430 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 GOLGA8DPQ0D2H9 430 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 BTBD8Q5XKL5 378 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 HTR3DQ70Z44 454 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 KBTBD6Q86V97 674 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 PIGZQ86VD9 579 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 MIB1Q86YT6 1006 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 ETFBKMTQ8IXQ9 262 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 PHTF2Q8N3S3 785 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 TSTD1Q8NFU3 115 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 CCDC26Q8TAB7 109 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 TPSD1Q9BZJ3 242 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 LSM7Q9UK45 103 aaKnown RBP19.36■□□□□ 0.69
PSPC1-202ENST00000427943 TSPAN16Q9UKR8 245 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 MMP17Q9ULZ9 603 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.36■□□□□ 0.69
PSPC1-202ENST00000427943 USP3Q9Y6I4 520 aa19.36■□□□□ 0.69
PSPC1-202ENST00000427943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.35■□□□□ 0.69
PSPC1-202ENST00000427943 TULP2O00295 520 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 TULP3O75386 442 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 KLF8O95600 359 aaPredicted RBP19.35■□□□□ 0.69
PSPC1-202ENST00000427943 PSEN1P49768 467 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 DGKEP52429 567 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 YWHAEP62258 255 aaKnown RBP19.35■□□□□ 0.69
PSPC1-202ENST00000427943 LMNB2Q03252 620 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 SGO2Q562F6 1265 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 EMC10Q5UCC4 262 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 ALLCQ8N6M5 410 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 UBR7Q8N806 425 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 ANKRD52Q8NB46 1076 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 FAM124BQ9H5Z6 455 aaPredicted RBP19.35■□□□□ 0.69
PSPC1-202ENST00000427943 SEMA4GQ9NTN9 838 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 RASAL2Q9UJF2 1139 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 DNMT3LQ9UJW3 386 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 PLXND1Q9Y4D7 1925 aa19.35■□□□□ 0.69
PSPC1-202ENST00000427943 BICDL2A1A5D9 508 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 NEDD8-MDP1E9PL57 170 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 TRIM24O15164 1050 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 STC2O76061 302 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 CHRM1P11229 460 aaPredicted RBP19.34■□□□□ 0.69
PSPC1-202ENST00000427943 RALAP11233 206 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 TBXAS1P24557 533 aaPredicted RBP19.34■□□□□ 0.69
PSPC1-202ENST00000427943 GRIA2P42262 883 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 TKTL1P51854 596 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 BCAT1P54687 386 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 SLC8A3P57103 927 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 MRPS21P82921 87 aaKnown RBP19.34■□□□□ 0.69
PSPC1-202ENST00000427943 PDE4CQ08493 712 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 CCDC6Q16204 474 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 RAB41Q5JT25 222 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 ANO7Q6IWH7 933 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 KLHDC10Q6PID8 442 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 TPGS1Q6ZTW0 290 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 CACNA2D4Q7Z3S7 1137 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 IL17RCQ8NAC3 791 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 TXNDC5Q8NBS9 432 aaKnown RBP19.34■□□□□ 0.69
PSPC1-202ENST00000427943 KAT5Q92993 513 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 NT5C1BQ96P26 610 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 ABCA7Q8IZY2 2146 aa19.34■□□□□ 0.69
PSPC1-202ENST00000427943 CACNA1AO00555 2505 aa19.33■□□□□ 0.69
PSPC1-202ENST00000427943 CEP192Q8TEP8 1941 aa19.33■□□□□ 0.69
PSPC1-202ENST00000427943 SGK1O00141 431 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 DCLK1O15075 740 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 LRP3O75074 770 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 HMBSP08397 361 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 HNRNPLP14866 589 aaKnown RBP eCLIP19.33■□□□□ 0.68
PSPC1-202ENST00000427943 KIR2DL1P43626 348 aaPredicted RBP19.33■□□□□ 0.68
PSPC1-202ENST00000427943 PLA2G4AP47712 749 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 BST2Q10589 180 aaKnown RBP19.33■□□□□ 0.68
PSPC1-202ENST00000427943 EFEMP1Q12805 493 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 PAK1Q13153 545 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 PUM1Q14671 1186 aaKnown RBP eCLIP19.33■□□□□ 0.684e-6■□□□□ 9.2
PSPC1-202ENST00000427943 CRY1Q16526 586 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 TMEM92Q6UXU6 159 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 ERMP1Q7Z2K6 904 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 DGLUCYQ7Z3D6 616 aa19.33■□□□□ 0.68
PSPC1-202ENST00000427943 TADA2BQ86TJ2 420 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms