RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SCN1AP35498 2009 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 IGHV1OR15-9A0A0B4J2B8 117 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CUTAO60888 179 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 HNRNPLP14866 589 aaKnown RBP eCLIP12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CD6P30203 668 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC8A3P57103 927 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 COG7P83436 770 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CUL4AQ13619 759 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 BMT2Q1RMZ1 405 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FAM84AQ96KN4 292 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CAPN10Q9HC96 672 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 IL37Q9NZH6 218 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 GMIPQ9P107 970 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 WASF3Q9UPY6 502 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SDK1Q7Z5N4 2213 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PTPRJQ12913 1337 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TCHHQ07283 1943 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 A0A1B0GTW7 788 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FAM221BA6H8Z2 402 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TIMM44O43615 452 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CACNG3O60359 315 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CER1O95813 267 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TOP3BO95985 862 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CDH8P55286 799 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FAM173BQ6P4H8 233 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CNNM4Q6P4Q7 775 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ACOT1Q86TX2 421 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 C12orf56Q8IXR9 622 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CRYBG2Q8N1P7 616 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ARHGAP18Q8N392 663 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CADM4Q8NFZ8 388 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SETD7Q8WTS6 366 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NUP58Q9BVL2 599 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FGFBP2Q9BYJ0 223 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MIR1-1HGQ9H1L0 117 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CCDC86Q9H6F5 360 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PRDM16Q9HAZ2 1276 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC39A2Q9NP94 309 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZDHHC4Q9NPG8 344 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 STRIP2Q9ULQ0 834 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NFE2L3Q9Y4A8 694 aa12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZNF638Q14966 1978 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB3-203ENST00000425319 FAM92AA1XBS5 289 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TGFB1I1O43294 461 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SH3BP5O60239 455 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RARGP13631 454 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NDUFV2P19404 249 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ACO1P21399 889 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RING1Q06587 406 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SFSWAPQ12872 951 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 EGFLAMQ63HQ2 1017 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KLHDC10Q6PID8 442 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 EPM2AIP1Q7L775 607 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PHTF2Q8N3S3 785 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 TTC39CQ8N584 583 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 LINC00301Q8NCQ3 95 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SLC2A14Q8TDB8 520 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 HPS3Q969F9 1004 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SIPA1Q96FS4 1042 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CDC6Q99741 560 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 GABRG3Q99928 467 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 PNPLA8Q9NP80 782 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ITM2CQ9NQX7 267 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MARK1Q9P0L2 795 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 RALYQ9UKM9 306 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 KLK13Q9UKR3 277 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 SCML2Q9UQR0 700 aa12.93□□□□□ -0.34
HLA-DQB3-203ENST00000425319 A0A1W2PQF6 199 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 IKBKBO14920 756 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 YEATS4O95619 227 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 NCAM1P13591 858 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 CD59P13987 128 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 ADORA2BP29275 332 aa12.92□□□□□ -0.34
HLA-DQB3-203ENST00000425319 MATKP42679 507 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms