RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 CLN3Q13286 438 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 NCAPHQ15003 741 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 SPATA1Q5VX52 437 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 PTRH1Q86Y79 214 aaKnown RBP12.72□□□□□ -0.37
UFD1-203ENST00000421968 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
UFD1-203ENST00000421968 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
UFD1-203ENST00000421968 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 DEPDC7Q96QD5 511 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
UFD1-203ENST00000421968 PIRO00625 290 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 VILLO15195 856 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 YKT6O15498 198 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 EFSO43281 561 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 SYNCRIPO60506 623 aaKnown RBP12.71□□□□□ -0.37
UFD1-203ENST00000421968 CSO75390 466 aaKnown RBP12.71□□□□□ -0.37
UFD1-203ENST00000421968 TOM1L1O75674 476 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 EPHA8P29322 1005 aaPredicted RBP12.71□□□□□ -0.37
UFD1-203ENST00000421968 ACSL1P33121 698 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 TXKP42681 527 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 NPTX2P47972 431 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 GRIN1Q05586 938 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 KRTAP21-3Q3LHN1 58 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 PIK3AP1Q6ZUJ8 805 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 CATSPER3Q86XQ3 398 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 SKA1Q96BD8 255 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 SGF29Q96ES7 293 aa12.71□□□□□ -0.37
UFD1-203ENST00000421968 PCNX1Q96RV3 2341 aa12.71□□□□□ -0.38
UFD1-203ENST00000421968 MYH10P35580 1976 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 FBN3Q75N90 2809 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 CLDN3O15551 220 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 MED24O75448 989 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 GJB6O95452 261 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 OLFM2O95897 454 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
UFD1-203ENST00000421968 ASIC1P78348 528 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 MYL7Q01449 175 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 BNIP3Q12983 259 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 PDIA5Q14554 519 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 CALCRLQ16602 461 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 C3orf38Q5JPI3 329 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 RNF20Q5VTR2 975 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 XPO6Q96QU8 1125 aaKnown RBP12.7□□□□□ -0.38
UFD1-203ENST00000421968 TUFT1Q9NNX1 390 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 KMT5AQ9NQR1 393 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 ARHGAP28Q9P2N2 729 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 SH3BP1Q9Y3L3 701 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 CELSR2Q9HCU4 2923 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 MED13Q9UHV7 2174 aa12.7□□□□□ -0.38
UFD1-203ENST00000421968 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 TSPAN3O60637 253 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 SEMA4FO95754 770 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 CENPBP07199 599 aaPredicted RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 TAF6P49848 677 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 ZNF132P52740 706 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 BCAT1P54687 386 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 RACK1P63244 317 aaKnown RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 CDCP2Q5VXM1 449 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 ZNF564Q8TBZ8 553 aaPredicted RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 BRF1Q92994 677 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 SLC46A1Q96NT5 459 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 TRIM9Q9C026 710 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 NCOA5Q9HCD5 579 aaKnown RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 TMPRSS4Q9NRS4 437 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 GTF3C4Q9UKN8 822 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 ATXN7L1Q9ULK2 861 aaPredicted RBP12.69□□□□□ -0.38
UFD1-203ENST00000421968 SATB2Q9UPW6 733 aa12.69□□□□□ -0.38
UFD1-203ENST00000421968 OPA1O60313 960 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 CACNG3O60359 315 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
UFD1-203ENST00000421968 ACAT1P24752 427 aaKnown RBP12.68□□□□□ -0.38
UFD1-203ENST00000421968 COPAP53621 1224 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 USP46P62068 366 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 CCT2P78371 535 aaKnown RBP12.68□□□□□ -0.38
UFD1-203ENST00000421968 DAB2P98082 770 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 MCL1Q07820 350 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 STRN3Q13033 797 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 ZNF787Q6DD87 383 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 JADE1Q6IE81 842 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 Q6ZUG5 572 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 SPATA20Q8TB22 786 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 SLC6A18Q96N87 628 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 BBS2Q9BXC9 721 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 GDF3Q9NR23 364 aa12.68□□□□□ -0.38
UFD1-203ENST00000421968 GEMIN8Q9NWZ8 242 aaKnown RBP12.68□□□□□ -0.38
UFD1-203ENST00000421968 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms