RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 EOMESO95936 686 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 NR1D1P20393 614 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 SPRP35270 261 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 MFSD4BQ5TF39 518 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 HAS1Q92839 578 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 MS4A14Q96JA4 679 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 RIPK3Q9Y572 518 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ERVK-10P10266 1014 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ICAM3P32942 547 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 PTK7Q13308 1070 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 C2orf49Q9BVC5 232 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 FAM129AQ9BZQ8 928 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 CLPBQ9H078 707 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 BRD8Q9H0E9 1235 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 HES2Q9Y543 173 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 OR6C75A6NL08 312 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 H2AFYO75367 372 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 SNHG28P0DPA3 235 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 CDH8P55286 799 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 USP10Q14694 798 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 STAT4Q14765 748 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ACOX1Q15067 660 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TPGS1Q6ZTW0 290 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TFAP2DQ7Z6R9 452 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 LGI2Q8N0V4 545 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 LZTR1Q8N653 840 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 RIPOR3Q96MK2 946 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TRIM55Q9BYV6 548 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 PADI3Q9ULW8 664 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 SERPINF2P08697 491 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TGM2P21980 687 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 GTF2BQ00403 316 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 MARC1Q5VT66 337 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 LMNTD2Q8IXW0 634 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ZNF606Q8WXB4 792 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ARNTL2Q8WYA1 636 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 OSGEPL1Q9H4B0 414 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 PKD2L2Q9NZM6 624 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TOGARAM1Q9Y4F4 1720 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 FAM95CA0A1B0GW59 222 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 SP100P23497 879 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 SCNN1BP51168 640 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 PPIL6Q8IXY8 311 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 BCAS4Q8TDM0 211 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TEKT4Q8WW24 435 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TXLNGQ9NUQ3 528 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 FBXO10Q9UK96 956 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 DYRK3O43781 588 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 DIAPH2O60879 1101 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 DCTN3O75935 186 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 LTFP02788 710 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 NFICP08651 508 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ZNF268Q14587 947 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 EARS2Q5JPH6 523 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 CPA6Q8N4T0 437 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 ETNPPLQ8TBG4 499 aa11.1□□□□□ -0.63
PTCH1-206ENST00000421141 CPSF2Q9P2I0 782 aaKnown RBP11.1□□□□□ -0.63
PTCH1-206ENST00000421141 RHOBTB1O94844 696 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 CAPSQ13938 189 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SPDYE7PQ495Y7 208 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 ACBD5Q5T8D3 534 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 FBXL19Q6PCT2 694 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SPATA4Q8NEY3 305 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SPACA7Q96KW9 195 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 APOL5Q9BWW9 433 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 CHORDC1Q9UHD1 332 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 CCDC195A0A1B0GUA6 201 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 KITP10721 976 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 GET4Q7L5D6 327 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 OTUB1Q96FW1 271 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 CYTH2Q99418 400 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 BRAFP15056 766 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 ARF4P18085 180 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 ACLYP53396 1101 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 USP45Q70EL2 814 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 TATDN2Q93075 761 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 RBM15Q96T37 977 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTCH1-206ENST00000421141 PITPNM3Q9BZ71 974 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 BRD9Q9H8M2 597 aa11.09□□□□□ -0.63
PTCH1-206ENST00000421141 MSH3P20585 1137 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms