RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 SFMBT2Q5VUG0 894 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 BSPRYQ5W0U4 402 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 BTBD8Q5XKL5 378 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 E4F1Q66K89 784 aaPredicted RBP21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 TRIM72Q6ZMU5 477 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 HFE2Q6ZVN8 426 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 DDX42Q86XP3 938 aaKnown RBP eCLIP21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 SCUBE3Q8IX30 993 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 IPO4Q8TEX9 1081 aaKnown RBP21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 ZFRQ96KR1 1074 aaKnown RBP21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 BRD9Q9H8M2 597 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 AIPL1Q9NZN9 384 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 NUDT5Q9UKK9 219 aa21.64■■□□□ 1.05
HMGXB4-203ENST00000420166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.64■■□□□ 1.051e-7■■□□□ 14.2
HMGXB4-203ENST00000420166 COL4A2P08572 1712 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 LEFTY2O00292 366 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 ZNF263O14978 683 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 MDM4O15151 490 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 CHADO15335 359 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 LTFP02788 710 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 CYP1A1P04798 512 aaPredicted RBP21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 GYPCP04921 128 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 SNX16P57768 344 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 SIGLEC14Q08ET2 396 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 MTF1Q14872 753 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 ARHGAP29Q52LW3 1261 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 NAA35Q5VZE5 725 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 SPECC1LQ69YQ0 1117 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 RSRC2Q7L4I2 434 aaKnown RBP21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 VSTM4Q8IW00 320 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 TTC16Q8NEE8 873 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 EPHX3Q9H6B9 360 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 THG1LQ9NWX6 298 aaKnown RBP21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 DNMT3LQ9UJW3 386 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 CAPN11Q9UMQ6 739 aa21.63■■□□□ 1.05
HMGXB4-203ENST00000420166 ERBB2P04626 1255 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 ZBED6P86452 979 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 PFKPQ01813 784 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 ZNF397Q8NF99 534 aaPredicted RBP21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 CPLX3Q8WVH0 158 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 EDEM1Q92611 657 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 GOLGA1Q92805 767 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 IRF7Q92985 503 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 AGPAT1Q99943 283 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 KLF16Q9BXK1 252 aaPredicted RBP21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 TRIM5Q9C035 493 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 NUCKS1Q9H1E3 243 aaKnown RBP21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 SYNCQ9H7C4 482 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 ABCC13Q9NSE7 274 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 OLA1Q9NTK5 396 aaKnown RBP21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 CFAP97Q9P2B7 532 aa21.62■■□□□ 1.05
HMGXB4-203ENST00000420166 ARNTLO00327 626 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 PRKCIP41743 596 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 TRIM14Q14142 442 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 CC2D1AQ6P1N0 951 aaPredicted RBP21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 TRIM67Q6ZTA4 783 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 ERICH1Q86X53 443 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 KIAA1958Q8N8K9 716 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 RNF139Q8WU17 664 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 CPA5Q8WXQ8 436 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 DNASE1L2Q92874 299 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 FAM149B1Q96BN6 582 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 ASIC4Q96FT7 647 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 ZFYVE19Q96K21 471 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 PCDHB18PQ96TA0 734 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 SYT11Q9BT88 431 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 GKN1Q9NS71 199 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 MARCH2Q9P0N8 246 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 WNT16Q9UBV4 365 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 RASAL2Q9UJF2 1139 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 FBXL21Q9UKT6 434 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 LUC7L2Q9Y383 392 aaKnown RBP21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 MUC3AQ02505 3323 aa21.61■■□□□ 1.05
HMGXB4-203ENST00000420166 F5P12259 2224 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 FAM170AA1A519 330 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 GABRB2P47870 512 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 EFEMP1Q12805 493 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 OR6B2Q6IFH4 312 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 MSANTD2Q6P1R3 559 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 FAM183BPQ6ZVS7 135 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 MIB1Q86YT6 1006 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 MSANTD4Q8NCY6 345 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 OLIG1Q8TAK6 271 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 SYN2Q92777 582 aaPredicted RBP21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 PIWIL1Q96J94 861 aaKnown RBP21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 FAM83CQ9BQN1 747 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 TRIM62Q9BVG3 475 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 TRPV5Q9NQA5 729 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 SEPT11Q9NVA2 429 aaKnown RBP21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 STRIP2Q9ULQ0 834 aa21.6■■□□□ 1.05
HMGXB4-203ENST00000420166 E2F8A0AVK6 867 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 FYNP06241 537 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 UNGP13051 313 aaPredicted RBP21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 CASP14P31944 242 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 GOLGA8FQ08AF8 430 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 GOLGA8DPQ0D2H9 430 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 KLHL30Q0D2K2 578 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 CLEC16AQ2KHT3 1053 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 OLFML1Q6UWY5 402 aa21.59■■□□□ 1.05
HMGXB4-203ENST00000420166 BEND5Q7L4P6 421 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms