RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HELQQ8TDG4 1101 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC16A10Q8TF71 515 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 DCAF4Q8WV16 495 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 IRGQQ8WZA9 623 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 CPT1BQ92523 772 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 MKL1Q969V6 931 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 SELENONQ9NZV5 590 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 WRAP73Q9P2S5 460 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 SEL1LQ9UBV2 794 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 HBS1LQ9Y450 684 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 SIPA1L1O43166 1804 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 TCRBV9S1A1TA0A576 114 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 WEE2P0C1S8 567 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 FAM58BPP0C7Q3 252 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 RBP3P10745 1247 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 COL6A2P12110 1019 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 PORP16435 677 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 HOXD12P35452 270 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 ITPRIPL1Q6GPH6 555 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 LPCAT2Q7L5N7 544 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 TRIM50Q86XT4 487 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 PPIL6Q8IXY8 311 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 JADE3Q92613 823 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 FAM81BQ96LP2 452 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 CCT7Q99832 543 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 THEGQ9P2T0 379 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 RSL24D1Q9UHA3 163 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
NCKIPSD-204ENST00000416649 KBTBD13C9JR72 458 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 TBX3O15119 743 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 TMEM63AO94886 807 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 MRPS22P82650 360 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 PPP6R3Q5H9R7 873 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 TXNRD3NBQ6F5E7 133 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 PQLC1Q8N2U9 271 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 PPP4R1Q8TF05 950 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 RSAD2Q8WXG1 361 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 MBOAT7Q96N66 472 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 HSD17B14Q9BPX1 270 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 C1orf21Q9H246 121 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 COPS7BQ9H9Q2 264 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 APOBEC2Q9Y235 224 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 P4HA2O15460 535 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 AP1G1O43747 822 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 CCNT2O60583 730 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 NR1H2P55055 460 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 RPL7AP62424 266 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 PHEXP78562 749 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 GSTM4Q03013 218 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 STX3Q13277 289 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 LMBRD2Q68DH5 695 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 KRT39Q6A163 491 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 OLFML1Q6UWY5 402 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 GFM2Q969S9 779 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 C7orf26Q96N11 449 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 DHRS4Q9BTZ2 278 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 PCDH9Q9HC56 1237 aa15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 HERC5Q9UII4 1024 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-204ENST00000416649 AVILO75366 819 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 UNGP13051 313 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 DSG3P32926 999 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 PSMC5P62195 406 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 RARS2Q5T160 578 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 NBPF12Q5TAG4 269 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 POLNQ7Z5Q5 900 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 ZBTB46Q86UZ6 589 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 WDR75Q8IWA0 830 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 SLX1AQ9BQ83 275 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 SPATA7Q9P0W8 599 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 CEPT1Q9Y6K0 416 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 TMEM247A6NEH6 219 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 E9PBE3 544 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 H3BNX3 289 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 GAS7O60861 476 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 CYP3A4P08684 503 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 HALP42357 657 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 RXRGP48443 463 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 CD151P48509 253 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 AP3B2Q13367 1082 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 BBS5Q8N3I7 341 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 RNF148Q8N7C7 305 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 GLT8D2Q9H1C3 349 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 ARMC7Q9H6L4 198 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 AVENQ9NQS1 362 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 DNAJC16Q9Y2G8 782 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 SF3B1O75533 1304 aaKnown RBP eCLIP15.23■□□□□ 0.031e-8■■■■■ 103.4
NCKIPSD-204ENST00000416649 CEP350Q5VT06 3117 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 TBCCQ15814 346 aa15.23■□□□□ 0.03
NCKIPSD-204ENST00000416649 POTEHQ6S545 545 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms