RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 RIPK1Q13546 671 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CA9Q16790 459 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SOWAHAQ2M3V2 549 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ALKAL1Q6UXT8 129 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ARCQ7LC44 396 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PNMA8AQ86V59 439 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CDKL3Q8IVW4 592 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CRYBG2Q8N1P7 616 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 TCP10LQ8TDR4 215 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 OSMRQ99650 979 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 B3GNT5Q9BYG0 378 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 VPS11Q9H270 941 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PNPLA8Q9NP80 782 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 HES2Q9Y543 173 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CITO14578 2027 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PLXNB2O15031 1838 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 A6NJR5 290 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 GABBR2O75899 941 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 DCTN3O75935 186 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ECM2O94769 699 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 DARSP14868 501 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC8A1P32418 973 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PTK7Q13308 1070 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 GLRA4Q5JXX5 417 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 FBXO47Q5MNV8 452 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC26A9Q7LBE3 791 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF408Q9H9D4 720 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CDHR5Q9HBB8 845 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CYLDQ9NQC7 956 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 IGF2BP3O00425 579 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 XPOTO43592 962 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ATP5HO75947 161 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 RECQL4O94761 1208 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ATP6V1G2O95670 118 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 CYP2C9P11712 490 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 CYP2F1P24903 491 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ADRA1DP25100 572 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 GNL1P36915 607 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 MAGEA6P43360 314 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 NR2C2P49116 596 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 KCNJ2P63252 427 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 DPYSL2Q16555 572 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 PLEKHH3Q7Z736 793 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 FAM228AQ86W67 206 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 BRI3BPQ8WY22 251 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 CENPIQ92674 756 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 LRRC37BQ96QE4 947 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 DPEP3Q9H4B8 488 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ARHGEF3Q9NR81 526 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ETNK2Q9NVF9 386 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 BAIAP2L1Q9UHR4 511 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 KPNA7A9QM74 516 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 GOLGA8RI6L899 631 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 PIRO00625 290 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 LPXNO60711 386 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 AVILO75366 819 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 SMIM10L2AP0DMW4 78 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 SMIM10L2BP0DMW5 78 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ALADP13716 330 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 CCNB1P14635 433 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.52e-6■■■■□ 20.1
TRAFD1-202ENST00000412615 L1CAMP32004 1257 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ACADSBP45954 432 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 SYCP2LQ5T4T6 812 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 FYB2Q5VWT5 728 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 LRRC39Q96DD0 335 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 THOC1Q96FV9 657 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF560Q96MR9 790 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 TSPAN18Q96SJ8 248 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 C11orf84Q9BUA3 381 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 SNX25Q9H3E2 840 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 NXF3Q9H4D5 531 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 DHX35Q9H5Z1 703 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 NOD2Q9HC29 1040 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 TXLNGQ9NUQ3 528 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC5A4Q9NY91 659 aa11.93□□□□□ -0.5
TRAFD1-202ENST00000412615 TRDMT1O14717 391 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 HGSO14964 777 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 UNC5CO95185 931 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 APRTP07741 180 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 PDGFRBP09619 1106 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ADORA2BP29275 332 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 PNPLA4P41247 253 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 RPL34P49207 117 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 YWHAZP63104 245 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 LGSNQ5TDP6 509 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 ASRGL1Q7L266 308 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 OTOAQ7RTW8 1153 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC26A11Q86WA9 606 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 MCUQ8NE86 351 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 HSFY1Q96LI6 401 aa11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 KLF6Q99612 283 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-202ENST00000412615 APOL6Q9BWW8 343 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms