RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SH3BP1Q9Y3L3 701 aa20.05■□□□□ 0.8
SF3A1-202ENST00000411423 SLC9A3R1O14745 358 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 HRO43593 1189 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 PAEPP09466 180 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 CCDC192P0DO97 292 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 PXNP49023 591 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 TKTL1P51854 596 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 BCAT1P54687 386 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 GCNT1Q02742 428 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 BST2Q10589 180 aaKnown RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 HEATR6Q6AI08 1181 aaKnown RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 HTR3DQ70Z44 454 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 TMEM25Q86YD3 366 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 RBBP8NLQ8NC74 664 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 ATRIPQ8WXE1 791 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 FAM126AQ9BYI3 521 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 DNAI2Q9GZS0 605 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 NUP62CLQ9H1M0 184 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 EPC1Q9H2F5 836 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 TBC1D14Q9P2M4 693 aa20.04■□□□□ 0.8
SF3A1-202ENST00000411423 AJAP1Q9UKB5 411 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-202ENST00000411423 TRIM24O15164 1050 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 KLKB1P03952 638 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 ADH5P11766 374 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 SLC9A1P19634 815 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 PLA2G4AP47712 749 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 SEC13P55735 322 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 C10orf120Q5SQS8 335 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 PM20D1Q6GTS8 502 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 KLHDC10Q6PID8 442 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 LCLAT1Q6UWP7 414 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 Q6ZNB5 142 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 CREBRFQ8IUR6 639 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 ETFBKMTQ8IXQ9 262 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 CLIC5Q9NZA1 410 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.03■□□□□ 0.8
SF3A1-202ENST00000411423 CNTN6Q9UQ52 1028 aa20.03■□□□□ 0.8
SF3A1-202ENST00000411423 PIK3R2O00459 728 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 STC2O76061 302 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 FGFR1OPO95684 399 aaKnown RBP20.02■□□□□ 0.8
SF3A1-202ENST00000411423 RGS7P49802 495 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 YWHAGP61981 247 aaKnown RBP eCLIP20.02■□□□□ 0.8
SF3A1-202ENST00000411423 ADIGQ0VDE8 80 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 CETN1Q12798 172 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 PMF1Q6P1K2 205 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 MIB1Q86YT6 1006 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 ZNF276Q8N554 614 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 NAT16Q8N8M0 369 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 SLC35F5Q8WV83 523 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 SECISBP2LQ93073 1101 aaKnown RBP20.02■□□□□ 0.8
SF3A1-202ENST00000411423 UBE2TQ9NPD8 197 aaPredicted RBP20.02■□□□□ 0.8
SF3A1-202ENST00000411423 ACP6Q9NPH0 428 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 SPHK2Q9NRA0 654 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 RASAL2Q9UJF2 1139 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 DNMT3LQ9UJW3 386 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 SMG5Q9UPR3 1016 aaKnown RBP20.02■□□□□ 0.8
SF3A1-202ENST00000411423 GPR179Q6PRD1 2367 aa20.02■□□□□ 0.8
SF3A1-202ENST00000411423 HOXC11O43248 304 aaPredicted RBP20.01■□□□□ 0.79
SF3A1-202ENST00000411423 ZBED1O96006 694 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 NRLP54845 237 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 KDSRQ06136 332 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 EFEMP1Q12805 493 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 PPP2R5DQ14738 602 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 CNGA2Q16280 664 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 LPAL2Q16609 132 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 FBXO43Q4G163 708 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 HSP90AA4PQ58FG1 418 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 EMC10Q5UCC4 262 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 TRIM65Q6PJ69 517 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 USP33Q8TEY7 942 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 KCTD13Q8WZ19 329 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 OTUB2Q96DC9 234 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 HHIPQ96QV1 700 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 SIX2Q9NPC8 291 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 ZDHHC4Q9NPG8 344 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 HESX1Q9UBX0 185 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 KIAA1257Q9ULG3 409 aa20.01■□□□□ 0.79
SF3A1-202ENST00000411423 DMXL1Q9Y485 3027 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 YJEFN3A6XGL0 299 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 BECN2A8MW95 431 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 E7ENQ6 273 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 M0QYV0 167 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 ADH1CP00326 375 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 HMBSP08397 361 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 SETSIPP0DME0 302 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 LCP1P13796 627 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 HNRNPLP14866 589 aaKnown RBP eCLIP20■□□□□ 0.79
SF3A1-202ENST00000411423 HOXA6P31267 233 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 PSEN1P49768 467 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 GAD2Q05329 585 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 DPY19L2P1Q6NXN4 242 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 WDR5BQ86VZ2 330 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 LONP2Q86WA8 852 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 CLEC4CQ8WTT0 213 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 PNKPQ96T60 521 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 HCN2Q9UL51 889 aa20■□□□□ 0.79
SF3A1-202ENST00000411423 TULP3O75386 442 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 KAT7O95251 611 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 RALAP11233 206 aa19.99■□□□□ 0.79
SF3A1-202ENST00000411423 EIF2DP41214 584 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms