RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 NACA2Q9H009 215 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC6A17Q9H1V8 727 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 FOXP1Q9H334 677 aaPredicted RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PARVGQ9HBI0 331 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CD248Q9HCU0 757 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 OSGEPQ9NPF4 335 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CD93Q9NPY3 652 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SPHK2Q9NRA0 654 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 DNAJC17Q9NVM6 304 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 GDAP2Q9NXN4 497 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 GMIPQ9P107 970 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP36Q9P275 1121 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 WDR35Q9P2L0 1181 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 DNMT3LQ9UJW3 386 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 AGO2Q9UKV8 859 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 HCN2Q9UL51 889 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 CDH9Q9ULB4 789 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ODF2LQ9ULJ1 636 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 NOL7Q9UMY1 257 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 AGAP1Q9UPQ3 857 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 BTBD3Q9Y2F9 522 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKRD6Q9Y2G4 727 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SNX11Q9Y5W9 270 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SNX9Q9Y5X1 595 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 RAD54BQ9Y620 910 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 STON1Q9Y6Q2 735 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 EML5Q05BV3 1969 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRIP11Q15643 1979 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 SHROOM3Q8TF72 1996 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLXNB3Q9ULL4 1909 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP9YO00507 2555 aaPredicted RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 LAMA5O15230 3695 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 POLQO75417 2590 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NPHP3-ACAD11A0A0J9YXS1 232 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 A0A1B0GTQ1 180 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PP2D1A8MPX8 630 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 WASH3PC4AMC7 463 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKRD63C9JTQ0 380 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NEDD8-MDP1E9PL57 170 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 VILLO15195 856 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 YKT6O15498 198 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 KLK10O43240 276 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PAPSS1O43252 624 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 COCHO43405 550 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CACNG3O60359 315 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 BRINP1O60477 761 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 JAK2O60674 1132 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATP2C2O75185 946 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBCAO75347 108 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM13AO94988 1023 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 RTN3O95197 1032 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 IGLV3-19P01714 112 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ITGB3P05106 788 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ITGAVP06756 1048 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 KRT19P08727 400 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PDGFRBP09619 1106 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM163BP0C2L3 166 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMEM191BP0C7N4 346 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLA2G4BP0C869 781 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 IRF1P10914 325 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TYRP14679 529 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLCG1P19174 1290 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ABCB4P21439 1286 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GLDCP23378 1020 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 LMO2P25791 158 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CD27P26842 260 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 YWHAQP27348 245 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ADSSP30520 456 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRPHP41219 470 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CTSKP43235 329 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARRB1P49407 418 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TUBP50607 506 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF131P52739 623 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 BCAT1P54687 386 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC12A3P55017 1021 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CDH8P55286 799 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CLDN6P56747 220 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 C21orf59P57076 290 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCBP4P57723 403 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PSMC1P62191 440 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GTF2BQ00403 316 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 E2F1Q01094 437 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GUCY1B3Q02153 619 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CYP27A1Q02318 531 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARID5AQ03989 594 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GRIN1Q05586 938 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GOLGA8FQ08AF8 430 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GOLGA8DPQ0D2H9 430 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 IFRD2Q12894 506 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 DNAJC3Q13217 504 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ENPP2Q13822 863 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GNL2Q13823 731 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 LY6DQ14210 128 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCDC142Q17RM4 750 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SOWAHAQ2M3V2 549 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBC1D25Q3MII6 688 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 COLEC12Q5KU26 742 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 HYIQ5T013 277 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms