RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SLC5A2P31639 672 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 NPTX2P47972 431 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 FPGSQ05932 587 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 PLA1AQ53H76 456 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 MRNIPQ6NTE8 343 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 ESX1Q8N693 406 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 THAP4Q8WY91 577 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 SNX19Q92543 992 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 RSC1A1Q92681 617 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 MOGAT1Q96PD6 335 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 OSBPL9Q96SU4 736 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 TMX4Q9H1E5 349 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM83DQ9H4H8 585 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 UBN1Q9NPG3 1134 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 RIC8AQ9NPQ8 531 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 FEM1BQ9UK73 627 aa5.67□□□□□ -1.5
HMGB1P13-201ENST00000406019 H7C4K7 107 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 TOR1BO14657 336 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 PCDH17O14917 1159 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 YY2O15391 372 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 MPPED1O15442 326 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 NTSR2O95665 410 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 PECAM1P16284 738 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 TPH1P17752 444 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 CAPN3P20807 821 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 FBLP22087 321 aaKnown RBP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 CNTFP26441 200 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 PCSK6P29122 969 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 ATICP31939 592 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 CXCR5P32302 372 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 PTH2RP49190 550 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 MRPS35P82673 323 aaKnown RBP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 TLE2Q04725 743 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 NSUN2Q08J23 767 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 PTPRRQ15256 657 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 TXNRD1Q16881 649 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 INSCQ1MX18 579 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZNF750Q32MQ0 723 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 ADCK5Q3MIX3 580 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 KLHL17Q6TDP4 642 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC44A2Q8IWA5 706 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 ACTRT2Q8TDY3 377 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 SDCCAG3Q96C92 435 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 INO80BQ9C086 356 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 TWSG1Q9GZX9 223 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZBTB26Q9HCK0 441 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 LPAR3Q9UBY5 353 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 NRBP1Q9UHY1 535 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 ITIH6Q6UXX5 1313 aa5.66□□□□□ -1.5
HMGB1P13-201ENST00000406019 AQP7P3A6NL99 342 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 PRSS47A8MTI9 375 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 ADM5C9JUS6 153 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 FCHO1O14526 889 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 RRP9O43818 475 aaKnown RBP5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 RNASEH2AO75792 299 aaKnown RBP5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 ACTL6BO94805 426 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 NUDT3O95989 172 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 CHRM3P20309 590 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 PTDSS1P48651 473 aaKnown RBP5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 NDUFV1P49821 464 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZNF134P52741 427 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 IQCB1Q15051 598 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAXCQ5TGI0 409 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM180BQ6P0A1 224 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC30A10Q6XR72 485 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 ZNF575Q86XF7 245 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 SCAMP5Q8TAC9 235 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 FAM227BQ96M60 508 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 RTKNQ9BST9 563 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 SLC26A6Q9BXS9 759 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 AMBRA1Q9C0C7 1298 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 CDY1Q9Y6F8 540 aa5.65□□□□□ -1.5
HMGB1P13-201ENST00000406019 ADGRA2Q96PE1 1338 aa5.65□□□□□ -1.51
HMGB1P13-201ENST00000406019 B4E171 279 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 PEX1O43933 1283 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 SOAT2O75908 522 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 GYS1P13807 737 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 ITPKBP27987 946 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 ELF1P32519 619 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 TSPAN7P41732 249 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 GCLCP48506 637 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 TUBP50607 506 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 PRKAA2P54646 552 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 AP2B1P63010 937 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 TUBB3Q13509 450 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZIK1Q3SY52 487 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 TRIM60Q495X7 471 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 VPS53Q5VIR6 699 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 MZT2BQ6NZ67 158 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 KCTD20Q7Z5Y7 419 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 PEG10Q86TG7 708 aaKnown RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 TBC1D1Q86TI0 1168 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 ADGRG3Q86Y34 549 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 C2CD5Q86YS7 1000 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 DNAJC10Q8IXB1 793 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 PCYOX1LQ8NBM8 494 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 SMCR8Q8TEV9 937 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms