RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 ZFATQ9P243 1243 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 FZD9O00144 591 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 FCHO1O14526 889 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 MDM4O15151 490 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 NEBLO76041 1014 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 IL4RP24394 825 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 RBL1P28749 1068 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 C15orf59Q2T9L4 293 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 MUM1Q2TAK8 710 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 TRIM68Q6AZZ1 485 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 ANO7Q6IWH7 933 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 EEPD1Q7L9B9 569 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 APBB1IPQ7Z5R6 666 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 CDR2LQ86X02 465 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 TRIM50Q86XT4 487 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 UBA3Q8TBC4 463 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 AFG1LQ8WV93 481 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 E2F7Q96AV8 911 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 ZNF670Q9BS34 389 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 GBA2Q9HCG7 927 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-204ENST00000404424 SIRPGQ9P1W8 387 aa11.15□□□□□ -0.62
CLIP4-204ENST00000404424 E5RJQ4 531 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 NVLO15381 856 aaKnown RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 MAGEC1O60732 1142 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 RFPL1O75677 317 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 ARIH2O95376 493 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 PHKA2P46019 1235 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 SERPINB9P50453 376 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 RAP1GDS1P52306 607 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TBCCQ15814 346 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 DBN1Q16643 649 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CCDC14Q49A88 953 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 ACSBG2Q5FVE4 666 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TRNP1Q6NT89 227 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 RINLQ6ZS11 566 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CDHR3Q6ZTQ4 885 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 NT5DC4Q86YG4 428 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TMPRSS6Q8IU80 811 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 PQLC3Q8N755 202 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 NT5C1AQ9BXI3 368 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 WWP1Q9H0M0 922 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 MINDY3Q9H8M7 445 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 IFT122Q9HBG6 1241 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TSPAN16Q9UKR8 245 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 ITGA11Q9UKX5 1188 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 FAM237BA0A1B0GVD1 139 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 SLC15A5A6NIM6 579 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CXorf49A8MYA2 514 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 F8W8V4 182 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 BIRC5O15392 142 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 PSMG1O95456 288 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TPSB2P20231 275 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CRHR1P34998 444 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 MAGEA3P43357 314 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 NDST1P52848 882 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 SNX16P57768 344 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 MRPS5P82675 430 aaKnown RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TMPRSS15P98073 1019 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 OCRLQ01968 901 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 SLC34A1Q06495 639 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 KPNB1Q14974 876 aaKnown RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 RCN1Q15293 331 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TPSAB1Q15661 275 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CDO1Q16878 200 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 TREML2Q5T2D2 321 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CYS1Q717R9 158 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 CDKL3Q8IVW4 592 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 GSDMBQ8TAX9 411 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 STMN2Q93045 179 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 FAM167BQ9BTA0 163 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 NMUR2Q9GZQ4 415 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 PCDH18Q9HCL0 1135 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 STX18Q9P2W9 335 aaKnown RBP11.14□□□□□ -0.63
CLIP4-204ENST00000404424 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 MGAMO43451 1857 aa11.14□□□□□ -0.63
CLIP4-204ENST00000404424 WDR90Q96KV7 1748 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 FAM159BA6NKW6 160 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 CAPN14A8MX76 684 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 APRTP07741 180 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 GJB1P08034 283 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SETSIPP0DME0 302 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 ZFXP17010 805 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-204ENST00000404424 CNTFP26441 200 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 CDC25CP30307 473 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 SDC4P31431 198 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 CLCN3P51790 818 aa11.13□□□□□ -0.63
CLIP4-204ENST00000404424 RBP5P82980 135 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms