RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM191BP0C7N4 346 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 IRF1P10914 325 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ABCD1P33897 745 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 HOXD13P35453 343 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GNL1P36915 607 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ANO4Q32M45 955 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 HS2ST1Q7LGA3 356 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TRMT11Q7Z4G4 463 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CHPFQ8IZ52 775 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FBXO32Q969P5 355 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ELMO3Q96BJ8 720 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 OTUB2Q96DC9 234 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TOE1Q96GM8 510 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MKRN2Q9H000 416 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FAM124BQ9H5Z6 455 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MRPL44Q9H9J2 332 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PRDM16Q9HAZ2 1276 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 DNAJC17Q9NVM6 304 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 USP36Q9P275 1121 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 APOBEC2Q9Y235 224 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 COL6A6A6NMZ7 2263 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CACNG3O60359 315 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TACC1O75410 805 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GCNT3O95395 438 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 YWHAQP27348 245 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ITPKBP27987 946 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 LONP1P36776 959 aaKnown RBP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MAPRE1Q15691 268 aaKnown RBP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 HLA-BQ31612 363 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FUT11Q495W5 492 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 HECTD3Q5T447 861 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 KIAA1324Q6UXG2 1013 aaKnown RBP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TRAPPC11Q7Z392 1133 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SETD7Q8WTS6 366 aaKnown RBP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 HPS3Q969F9 1004 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GPR174Q9BXC1 333 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GAREM1Q9H706 876 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 OSER1Q9NX31 292 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PTPN13Q12923 2485 aa12.62□□□□□ -0.39
SPTLC1P3-201ENST00000403408 A0A087X0B3 334 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 A0A1B0GTW7 788 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 A0A1B0GVT2 93 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 NDUFS2O75306 463 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 BEST1O76090 585 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 LDHAP00338 332 aaKnown RBP12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 NCAM1P13591 858 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TYRP14679 529 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CD6P30203 668 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SLC5A3P53794 718 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CLDN6P56747 220 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MYO1EQ12965 1108 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PTPRNQ16849 979 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 KCNT1Q5JUK3 1230 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 DCAF12L1Q5VU92 463 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 BTBD8Q5XKL5 378 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TPGS1Q6ZTW0 290 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 HTR3DQ70Z44 454 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 OR6B3Q8NGW1 331 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZNF516Q92618 1163 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ANKRD36BP1Q96IX9 119 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TM7SF3Q9NS93 570 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MARK1Q9P0L2 795 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FBXO10Q9UK96 956 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SH3BP1Q9Y3L3 701 aa12.61□□□□□ -0.39
SPTLC1P3-201ENST00000403408 KCNK3O14649 394 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MDM4O15151 490 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CD2BP2O95400 341 aaKnown RBP12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZNF883P0CG24 379 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CDH8P55286 799 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SF3A1Q15459 793 aaKnown RBP12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 DUOXA2Q1HG44 320 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FAM35AQ86V20 835 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 RBBP8NLQ8NC74 664 aaPredicted RBP12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 B3GALNT2Q8NCR0 500 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 OVCA2Q8WZ82 227 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FOXJ1Q92949 421 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 BHMTQ93088 406 aa12.6□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms