RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TRIM24O15164 1050 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 RIPK2O43353 540 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ATP6V1G2O95670 118 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 GLP2RO95838 553 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 MZF1P28698 734 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CAP2P40123 477 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 MAGEA10P43363 369 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TMED10P49755 219 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TWF1Q12792 350 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CDH18Q13634 790 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 NAA30Q147X3 362 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 NCF4Q15080 339 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TAF1CQ15572 869 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF720Q7Z2F6 126 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ITIH5Q86UX2 942 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ARID3BQ8IVW6 561 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TAAR1Q96RJ0 339 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 APOL5Q9BWW9 433 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CDC42EP4Q9H3Q1 356 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 RIOX1Q9H6W3 641 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 NMRAL1Q9HBL8 299 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM49BQ9NUQ9 324 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 GGA2Q9UJY4 613 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 PRG3Q9Y2Y8 225 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM47E-STBD1D6RA91 191 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 H7C0S8 307 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 DYNC1LI2O43237 492 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 MED24O75448 989 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 UBTFL6P0CB48 400 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 JAK1P23458 1154 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 PTPN7P35236 360 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 GCNT1Q02742 428 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ELAVL2Q12926 359 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 NFYCQ13952 458 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 PDIA6Q15084 440 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP51A1Q16850 503 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF662Q6ZS27 426 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TMPRSS6Q8IU80 811 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 LRRC39Q96DD0 335 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 VAT1Q99536 393 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 AGXT2Q9BYV1 514 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM192AQ9GZU8 254 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 AP4E1Q9UPM8 1137 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 OTUD4Q01804 1114 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 PHKG1Q16816 387 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TRIM16LQ309B1 348 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ACBD5Q5T8D3 534 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ANKS6Q68DC2 871 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ZCCHC8Q6NZY4 707 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ABRAQ8N0Z2 381 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 MSL3Q8N5Y2 521 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM172AQ8WUF8 416 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TRAPPC9Q96Q05 1148 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 AHSPQ9NZD4 102 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 RPS6KL1Q9Y6S9 549 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 KIF1AQ12756 1690 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 DNALI1O14645 258 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 AP1G2O75843 785 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 VIL1P09327 827 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 IRF1P10914 325 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CAPZA2P47755 286 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 MSLNQ13421 630 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 RASA2Q15283 850 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ADCK2Q7Z695 626 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF467Q7Z7K2 595 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TTC30BQ8N4P2 665 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 AADATQ8N5Z0 425 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 OTULINQ96BN8 352 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 SH3GL2Q99962 352 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 IARS2Q9NSE4 1012 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 GGT7Q9UJ14 662 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TSR3Q9UJK0 312 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 IPPQ9Y573 584 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CEP170BQ9Y4F5 1589 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CD3EAPO15446 510 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CPA3P15088 417 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP2A7P20853 494 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 EPHB2P29323 1055 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 RAD23AP54725 363 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 LRRC74AQ0VAA2 488 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM132BQ14DG7 1078 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 SMTNL2Q2TAL5 461 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 FOXR2Q6PJQ5 311 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF410Q86VK4 478 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 INPP5DQ92835 1189 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 BTBD10Q9BSF8 475 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 DLGAP2Q9P1A6 1054 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 RPS6KB2Q9UBS0 482 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 PCDHA3Q9Y5H8 950 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 ACTL7BQ9Y614 415 aa8.61□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM114B3SHH9 223 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms