RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MPP3Q13368 585 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 C16orf72Q14CZ0 275 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 TTC27Q6P3X3 843 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 DHDDSQ86SQ9 333 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 RNF148Q8N7C7 305 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 RIN3Q8TB24 985 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 RMND5BQ96G75 393 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 CDRT15Q96T59 188 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 DENND2DQ9H6A0 471 aaPredicted RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 SP110Q9HB58 689 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 ARHGEF3Q9NR81 526 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 ANKRD63C9JTQ0 380 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 E5RI56 91 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 TSHRP16473 764 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 GLRA2P23416 452 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 IPMKQ8NFU5 416 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 PDCD2LQ9BRP1 358 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
HPS4-202ENST00000398145 ACOT9Q9Y305 439 aa11.41□□□□□ -0.58
HPS4-202ENST00000398145 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 TMEM150BA6NC51 233 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 MAGEB2O15479 319 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 PGM3O95394 542 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 ITGAVP06756 1048 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
HPS4-202ENST00000398145 RPL22P35268 128 aaKnown RBP11.4□□□□□ -0.58
HPS4-202ENST00000398145 RPL5P46777 297 aaKnown RBP11.4□□□□□ -0.58
HPS4-202ENST00000398145 RHBDL3P58872 404 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 ATG4CQ96DT6 458 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 DACH2Q96NX9 599 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 TRIM62Q9BVG3 475 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 AP5M1Q9H0R1 490 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 SMARCAD1Q9H4L7 1026 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 COG5Q9UP83 839 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 TYW5A2RUC4 315 aaKnown RBP11.4□□□□□ -0.58
HPS4-202ENST00000398145 PRPF4O43172 522 aaKnown RBP eCLIP11.4□□□□□ -0.58
HPS4-202ENST00000398145 KRT8P05787 483 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 SERPINB1P30740 379 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 KCNK10P57789 538 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 GTF2BQ00403 316 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 PRKAA1Q13131 559 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 CCDC153Q494R4 210 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 LINC00523Q86TU6 105 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 SNX32Q86XE0 403 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 PLD3Q8IV08 490 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 ULK2Q8IYT8 1036 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 APPL2Q8NEU8 664 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 CCDC126Q96EE4 140 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 GRIP2Q9C0E4 1043 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 LRRC4CQ9HCJ2 640 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 ARL8BQ9NVJ2 186 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.4□□□□□ -0.58
HPS4-202ENST00000398145 GRHL1Q9NZI5 618 aa11.4□□□□□ -0.58
HPS4-202ENST00000398145 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
HPS4-202ENST00000398145 GAS2O43903 313 aaKnown RBP11.4□□□□□ -0.59
HPS4-202ENST00000398145 SUPT7LO94864 414 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 ADRB2P07550 413 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 TXNP10599 105 aaKnown RBP11.4□□□□□ -0.59
HPS4-202ENST00000398145 CDH2P19022 906 aaPredicted RBP11.4□□□□□ -0.59
HPS4-202ENST00000398145 MIPP30301 263 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 NCKAP1LP55160 1127 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 LBRQ14739 615 aaKnown RBP11.4□□□□□ -0.59
HPS4-202ENST00000398145 PDK3Q15120 406 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 C6orf89Q6UWU4 347 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 ANGPTL8Q6UXH0 198 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 PALB2Q86YC2 1186 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 SCN4BQ8IWT1 228 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 MAB21L3Q8N8X9 362 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 SYTL5Q8TDW5 730 aaPredicted RBP11.4□□□□□ -0.59
HPS4-202ENST00000398145 TBCBQ99426 244 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 GORASP1Q9BQQ3 440 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 TMEM39BQ9GZU3 492 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 PAIP1Q9H074 479 aaKnown RBP11.4□□□□□ -0.59
HPS4-202ENST00000398145 RUBCNLQ9H714 662 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 MYRFQ9Y2G1 1151 aa11.4□□□□□ -0.59
HPS4-202ENST00000398145 CALCAP01258 141 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 KDELR1P24390 212 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 CDK7P50613 346 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 MRPS22P82650 360 aaKnown RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 SLC15A2Q16348 729 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 RNF220Q5VTB9 566 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 AGAP9Q5VTM2 703 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.39□□□□□ -0.59
HPS4-202ENST00000398145 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PCDHB18PQ96TA0 734 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 A0A0B4J269 797 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 KANSL1LA0AUZ9 987 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 GYS1P13807 737 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 CREB1P16220 341 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 HADHAP40939 763 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 JAM2P57087 298 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 GRIK5Q16478 980 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 NFIL3Q16649 462 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PLEKHA7Q6IQ23 1121 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 NIPA1Q7RTP0 329 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SAMD3Q8N6K7 520 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms