RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 GTSE1Q9NYZ3 720 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 UXTQ9UBK9 157 aaPredicted RBP26.75■■□□□ 1.87
U2AF1-203ENST00000398137 FBXO4Q9UKT5 387 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 PCDHGC3Q9UN70 934 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 PTPRZ1P23471 2315 aaPredicted RBP26.74■■□□□ 1.87
U2AF1-203ENST00000398137 RTN3O95197 1032 aaPredicted RBP26.74■■□□□ 1.87
U2AF1-203ENST00000398137 MMEP08473 750 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 ZBED6P86452 979 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 MTAPQ13126 283 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 TXNDC8Q6A555 127 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 TXNDC11Q6PKC3 985 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 YAF2Q8IY57 180 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 MAB21L3Q8N8X9 362 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 ZNF397Q8NF99 534 aaPredicted RBP26.74■■□□□ 1.87
U2AF1-203ENST00000398137 BPIFB1Q8TDL5 484 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 SLC35F5Q8WV83 523 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 GCNAQ96QF7 691 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 PDCL3Q9H2J4 239 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 CHRDQ9H2X0 955 aa26.74■■□□□ 1.87
U2AF1-203ENST00000398137 LUC7L2Q9Y383 392 aaKnown RBP26.74■■□□□ 1.87
U2AF1-203ENST00000398137 LAMTOR5O43504 91 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 CHRNB1P11230 501 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 YWHAQP27348 245 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 GPD2P43304 727 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 TNK2Q07912 1038 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 GAS6Q14393 721 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 ZNF528Q3MIS6 628 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 PMF1Q6P1K2 205 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 FMNL3Q8IVF7 1028 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 TTC8Q8TAM2 541 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 NELL1Q92832 810 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 USP13Q92995 863 aaPredicted RBP26.73■■□□□ 1.87
U2AF1-203ENST00000398137 FBXO32Q969P5 355 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 UBXN6Q9BZV1 441 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 PRMT8Q9NR22 394 aaPredicted RBP26.73■■□□□ 1.87
U2AF1-203ENST00000398137 EHD2Q9NZN4 543 aa26.73■■□□□ 1.87
U2AF1-203ENST00000398137 FAM170AA1A519 330 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 NCAM2O15394 837 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 CCDC172P0C7W6 258 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 CHRNB2P17787 502 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 KIF11P52732 1056 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 CDR2Q01850 454 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 TAF10Q12962 218 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 ARHGAP29Q52LW3 1261 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 TSSK4Q6SA08 328 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 IRF2BP2Q7Z5L9 587 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 C1orf131Q8NDD1 294 aaKnown RBP26.72■■□□□ 1.87
U2AF1-203ENST00000398137 LMAN1LQ9HAT1 526 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 IL37Q9NZH6 218 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 AIPL1Q9NZN9 384 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 CYTH4Q9UIA0 394 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 CEP83Q9Y592 693 aa26.72■■□□□ 1.87
U2AF1-203ENST00000398137 MYO16Q9Y6X6 1858 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 PIK3R2O00459 728 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 DPYSL4O14531 572 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 TDGF1P13385 188 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 CTHP32929 405 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 TKTL1P51854 596 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 FMO1Q01740 532 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 CSTF1Q05048 431 aaKnown RBP26.71■■□□□ 1.87
U2AF1-203ENST00000398137 GOLGA8FQ08AF8 430 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 GOLGA8DPQ0D2H9 430 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 ADIGQ0VDE8 80 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 RAB41Q5JT25 222 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 MON1AQ86VX9 555 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 ZNF677Q86XU0 584 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 CELF5Q8N6W0 485 aaKnown RBP26.71■■□□□ 1.87
U2AF1-203ENST00000398137 CSGALNACT1Q8TDX6 532 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 CHFRQ96EP1 664 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 SLITRK1Q96PX8 696 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 SLC22A12Q96S37 553 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 FAM83CQ9BQN1 747 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 NUCKS1Q9H1E3 243 aaKnown RBP26.71■■□□□ 1.87
U2AF1-203ENST00000398137 LHX5Q9H2C1 402 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 SEMA4AQ9H3S1 761 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 FBXO44Q9H4M3 255 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 LRRC4Q9HBW1 653 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 ST7Q9NRC1 585 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 COMMD8Q9NX08 183 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 GMIPQ9P107 970 aa26.71■■□□□ 1.87
U2AF1-203ENST00000398137 SPECC1L-ADORA2AF8WAN1 911 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 GABBR2O75899 941 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 TPM1P09493 284 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 DDX6P26196 483 aaKnown RBP eCLIP26.7■■□□□ 1.86
U2AF1-203ENST00000398137 PDCLQ13371 301 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 SIX6OS1Q8N1H7 587 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 WDTC1Q8N5D0 677 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 KCTD13Q8WZ19 329 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 HPS4Q9NQG7 708 aa26.7■■□□□ 1.86
U2AF1-203ENST00000398137 GVINP1Q7Z2Y8 2422 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 GOLGA6L3A6NEY3 463 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 OTOL1A6NHN0 477 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-203ENST00000398137 ADCY5O95622 1261 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 LMNAP02545 664 aaKnown RBP26.69■■□□□ 1.86
U2AF1-203ENST00000398137 LCP1P13796 627 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 KLHL30Q0D2K2 578 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 TBX2Q13207 712 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-203ENST00000398137 MAMSTRQ6ZN01 415 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 SUMF1Q8NBK3 374 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 ZBTB44Q8NCP5 570 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms