RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 UBE3AQ05086 875 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 RASA2Q15283 850 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 SLC15A2Q16348 729 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 PGBD3Q8N328 593 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 CPB2Q96IY4 423 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 UBXN6Q9BZV1 441 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 SCUBE2Q9NQ36 999 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 DOLKQ9UPQ8 538 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 RAD54BQ9Y620 910 aa17.88■□□□□ 0.45
UBFD1-201ENST00000395878 THP07101 528 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 ALOX15P16050 662 aaPredicted RBP17.87■□□□□ 0.45
UBFD1-201ENST00000395878 CYP2F1P24903 491 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 GLRBP48167 497 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 GCNT1Q02742 428 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 TMEM132BQ14DG7 1078 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 MTDHQ86UE4 582 aaKnown RBP17.87■□□□□ 0.45
UBFD1-201ENST00000395878 PDGFCQ9NRA1 345 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 IMPAD1Q9NX62 359 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 IL1RAPL1Q9NZN1 696 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 AP4S1Q9Y587 144 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 AP5Z1O43299 807 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 CCDC159P0C7I6 412 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 ATP6V1B1P15313 513 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 ITGALP20701 1170 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 PTPN4P29074 926 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 FUT11Q495W5 492 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 ZNF786Q8N393 782 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 JADE3Q92613 823 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 PNMA5Q96PV4 448 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 YIPF2Q9BWQ6 316 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 NMRK2Q9NPI5 230 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 NAALADL1Q9UQQ1 740 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 RIPK2O43353 540 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 CELF2O95319 508 aaKnown RBP17.87■□□□□ 0.45
UBFD1-201ENST00000395878 ANXA11P50995 505 aaKnown RBP17.87■□□□□ 0.45
UBFD1-201ENST00000395878 CNTN1Q12860 1018 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 PGM5Q15124 567 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 CD248Q9HCU0 757 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 TBC1D13Q9NVG8 400 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 BGNP21810 368 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 ZNF268Q14587 947 aaPredicted RBP17.87■□□□□ 0.45
UBFD1-201ENST00000395878 NIPA1Q7RTP0 329 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 COLGALT1Q8NBJ5 622 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 CLPBQ9H078 707 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 GANQ9H2C0 597 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 SEMA4AQ9H3S1 761 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 RXFP1Q9HBX9 757 aa17.87■□□□□ 0.45
UBFD1-201ENST00000395878 BARX2Q9UMQ3 279 aaPredicted RBP17.87■□□□□ 0.45
UBFD1-201ENST00000395878 MLNP12872 115 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 MAP3K7CLP57077 242 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 NUP107P57740 925 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 FBXO47Q5MNV8 452 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 TATDN2Q93075 761 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 A0A087WZ62 844 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 H3BQF6 201 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 TOMM70O94826 608 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 TGFB3P10600 412 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ZNF23P17027 643 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ZCWPW2Q504Y3 356 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 FDXACB1Q9BRP7 624 aaPredicted RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 EMILIN2Q9BXX0 1053 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 GPAMQ9HCL2 828 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 DNALI1O14645 258 aaPredicted RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 FKBP6O75344 327 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 MPOP05164 745 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 CXCL8P10145 99 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 RARRES1P49788 294 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 NFYCQ13952 458 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ERMARDQ5T6L9 678 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ZDHHC17Q8IUH5 632 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 SLC22A9Q8IVM8 553 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 CCDC33Q8N5R6 958 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 TMEM245Q9H330 911 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 RAB21Q9UL25 225 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 PPP2R3BQ9Y5P8 575 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 NWD1Q149M9 1564 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 DIP2BQ9P265 1576 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 NKRFO15226 690 aaKnown RBP eCLIP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 CYTH3O43739 400 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 IMPDH2P12268 514 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 SHMT1P34896 483 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ITGA9Q13797 1035 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 GALNTL6Q49A17 601 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 MRPS31Q92665 395 aaKnown RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 RRN3Q9NYV6 651 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 VANGL2Q9ULK5 521 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 GLP2RO95838 553 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 GHRP10912 638 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 MBL2P11226 248 aaPredicted RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 PSMC3P17980 439 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ILF2Q12905 390 aaKnown RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 SKIV2LQ15477 1246 aaKnown RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 OLFML2BQ68BL8 750 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ARMC6Q6NXE6 501 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 CENPLQ8N0S6 344 aaPredicted RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 TDRD5Q8NAT2 981 aaKnown RBP17.86■□□□□ 0.45
UBFD1-201ENST00000395878 ZNF606Q8WXB4 792 aa17.86■□□□□ 0.45
UBFD1-201ENST00000395878 CYP4F12Q9HCS2 524 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms