RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 DCP1BQ8IZD4 617 aaKnown RBP6.58□□□□□ -1.36
PTPN20-208ENST00000395727 SYCP3Q8IZU3 236 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 THEM5Q8N1Q8 247 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 PDILTQ8N807 584 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 CLDN23Q96B33 292 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 MRRFQ96E11 262 aaKnown RBP6.58□□□□□ -1.36
PTPN20-208ENST00000395727 FUBP3Q96I24 572 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN20-208ENST00000395727 CEP295NLQ96MC4 621 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 PKMYT1Q99640 499 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 ACBD6Q9BR61 282 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 CBWD1Q9BRT8 395 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 FAM213AQ9BRX8 229 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 RPP25Q9BUL9 199 aaKnown RBP6.58□□□□□ -1.36
PTPN20-208ENST00000395727 FGFBP2Q9BYJ0 223 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 IKZF4Q9H2S9 585 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 ZFP14Q9HCL3 533 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 INTS13Q9NVM9 706 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 TBC1D7Q9P0N9 293 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 USP25Q9UHP3 1055 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 CA14Q9ULX7 337 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 PCDHA7Q9UN72 937 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 AP4E1Q9UPM8 1137 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 SIT1Q9Y3P8 196 aa6.58□□□□□ -1.36
PTPN20-208ENST00000395727 TIMM13Q9Y5L4 95 aaPredicted RBP6.58□□□□□ -1.36
PTPN20-208ENST00000395727 TCHHQ07283 1943 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 PRR23AA6NEV1 266 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ZNF233A6NK53 670 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 SHISA7A6NL88 538 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 H0Y858 1186 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ARNTLO00327 626 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 POLR2DO15514 142 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TGFB1I1O43294 461 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 PRPF6O94906 941 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ITGB3P05106 788 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 HSP90AA1P07900 732 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 OR4Q2P0C623 313 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TMEM191BP0C7N4 346 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ATF6P18850 670 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 CDC25CP30307 473 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 POLR2BP30876 1174 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 HOXD13P35453 343 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 LHX1P48742 406 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ARPP19P56211 112 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ASIC1P78348 528 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 RBP5P82980 135 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TFAMQ00059 246 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 MYO1EQ12965 1108 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 DUSP4Q13115 394 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 VEPH1Q14D04 833 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 PSMD6Q15008 389 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ANGPT1Q15389 498 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ZNF528Q3MIS6 628 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 SLC44A4Q53GD3 710 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TANGO2Q6ICL3 276 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 VITQ6UXI7 678 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 MFSD6LQ8IWD5 586 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 PDCL2Q8N4E4 241 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TOP6BLQ8N6T0 577 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ATAD1Q8NBU5 361 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 GOLGA5Q8TBA6 731 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ZSCAN18Q8TBC5 510 aaPredicted RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ING5Q8WYH8 240 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 EZH1Q92800 747 aaPredicted RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ATOH1Q92858 354 aaPredicted RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 DHX58Q96C10 678 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TCEAL4Q96EI5 215 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 SAAL1Q96ER3 474 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 MCRS1Q96EZ8 462 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TRMT2BQ96GJ1 504 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ANKRD36BP1Q96IX9 119 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 RHOVQ96L33 236 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TMEM209Q96SK2 561 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 KXD1Q9BQD3 176 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 LTB4R2Q9NPC1 389 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 AGPAT3Q9NRZ7 376 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 SIX4Q9UIU6 781 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 FBXO4Q9UKT5 387 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 L1RE1Q9UN81 338 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 HPSEQ9Y251 543 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TLR6Q9Y2C9 796 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 MRPS17Q9Y2R5 130 aaKnown RBP6.57□□□□□ -1.36
PTPN20-208ENST00000395727 RAXQ9Y2V3 346 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 TRIOO75962 3097 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 SCN1AP35498 2009 aa6.57□□□□□ -1.36
PTPN20-208ENST00000395727 MIA3Q5JRA6 1907 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 PTPRJQ12913 1337 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 OBSL1O75147 1896 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.56□□□□□ -1.36
PTPN20-208ENST00000395727 MAN2B1O00754 1011 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 CHADO15335 359 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 NCAM2O15394 837 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 HUS1O60921 280 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 TACC1O75410 805 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 CSH1P0DML2 217 aa6.56□□□□□ -1.36
PTPN20-208ENST00000395727 CSH2P0DML3 217 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms