RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 CCDC186Q7Z3E2 898 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 MIB1Q86YT6 1006 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 CCDC33Q8N5R6 958 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-205ENST00000394892 TFAP2BQ92481 460 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 TMEM176AQ96HP8 235 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 LOXL4Q96JB6 756 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 HEXIM2Q96MH2 286 aaKnown RBP9.34□□□□□ -0.91
ATG4A-205ENST00000394892 RXFP3Q9NSD7 469 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 RMND1Q9NWS8 449 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 CACNA1BQ00975 2339 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 ANAPC1Q9H1A4 1944 aa9.34□□□□□ -0.91
ATG4A-205ENST00000394892 GOLGA6L4A6NEF3 574 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 SGK1O00141 431 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 HOXC11O43248 304 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-205ENST00000394892 GDF9O60383 454 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 ATG13O75143 517 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 KAT7O95251 611 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 ADH5P11766 374 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 RARGP13631 454 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 FMO5P49326 533 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 PDE6CP51160 858 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 LIMK1P53667 647 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 STX17P56962 302 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 LRRC63Q05C16 580 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 KDSRQ06136 332 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 NR1H3Q13133 447 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC6Q16204 474 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 FBXO43Q4G163 708 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 C2orf27AQ580R0 203 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 DCAF17Q5H9S7 520 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-205ENST00000394892 TCERG1LQ5VWI1 586 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 CACNA2D4Q7Z3S7 1137 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 PIGZQ86VD9 579 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 FRMD1Q8N878 549 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 NAT16Q8N8M0 369 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 IL17RCQ8NAC3 791 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 ANKRD52Q8NB46 1076 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 GAB3Q8WWW8 586 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 NELFBQ8WX92 580 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 EXOC4Q96A65 974 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 DHTKD1Q96HY7 919 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-205ENST00000394892 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 SMOC1Q9H4F8 434 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 FBXO44Q9H4M3 255 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 CD248Q9HCU0 757 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 PNPLA8Q9NP80 782 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 SPHK2Q9NRA0 654 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 ARMCX3Q9UH62 379 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-205ENST00000394892 INVSQ9Y283 1065 aa9.33□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 PRRT4C9JH25 899 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 O00370 1275 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 SLC9A3R1O14745 358 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-205ENST00000394892 AXIN1O15169 862 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 PMM2O15305 246 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 TULP3O75386 442 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 STC2O76061 302 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 CISD3P0C7P0 127 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 CCDC192P0DO97 292 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 AMPD2Q01433 879 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 APBA1Q02410 837 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 PDE4CQ08493 712 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 PLK5Q496M5 336 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 PM20D1Q6GTS8 502 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 RASSF3Q86WH2 238 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 DDX42Q86XP3 938 aaKnown RBP eCLIP9.32□□□□□ -0.92
ATG4A-205ENST00000394892 IRF2BP1Q8IU81 584 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 ZNF276Q8N554 614 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 CAMKK1Q8N5S9 505 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 ALLCQ8N6M5 410 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 UBA3Q8TBC4 463 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 PNKPQ96T60 521 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 ACOX2Q99424 681 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 TSG101Q99816 390 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 UBXN6Q9BZV1 441 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 IMPG2Q9BZV3 1241 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 DUSP15Q9H1R2 295 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-205ENST00000394892 TLR8Q9NR97 1041 aaKnown RBP9.32□□□□□ -0.92
ATG4A-205ENST00000394892 TBC1D14Q9P2M4 693 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 EBF1Q9UH73 591 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 CLEC4EQ9ULY5 219 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 CTNND2Q9UQB3 1225 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
ATG4A-205ENST00000394892 GFRA2O00451 464 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 STX10O60499 249 aa9.31□□□□□ -0.92
ATG4A-205ENST00000394892 RPP40O75818 363 aaKnown RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 KLF8O95600 359 aaPredicted RBP9.31□□□□□ -0.92
ATG4A-205ENST00000394892 ADH1CP00326 375 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms