RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 GIMAP4Q9NUV9 329 aa12.97□□□□□ -0.33
SLC28A1-203ENST00000394573 OLAHQ9NV23 265 aa12.97□□□□□ -0.33
SLC28A1-203ENST00000394573 ILVBLA1L0T0 632 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 MEN1O00255 615 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 CYB561D2O14569 222 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 DYNC1LI2O43237 492 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 GGPS1O95749 300 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 XRCC5P13010 732 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 CASP4P49662 377 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 PMS2P3Q13401 168 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 FAM47AQ5JRC9 791 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 CHERPQ8IWX8 916 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 ZNF786Q8N393 782 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 BANPQ8N9N5 519 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 SLC4A11Q8NBS3 891 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 GIPC2Q8TF65 315 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 TCF12Q99081 682 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 MMP19Q99542 508 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 WWP1Q9H0M0 922 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 RPAP3Q9H6T3 665 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 NDFIP2Q9NV92 336 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 COQ3Q9NZJ6 369 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 ANKMY1Q9P2S6 941 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 PADI4Q9UM07 663 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 TRAF6Q9Y4K3 522 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.33
SLC28A1-203ENST00000394573 KAT6AQ92794 2004 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 MSI1O43347 362 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 BMP10O95393 424 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 TGDSO95455 350 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 MSL3P1P0C860 447 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 MCF2P10911 925 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 CD1EP15812 388 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 ITGAXP20702 1163 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 EPHA7Q15375 998 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 ALX1Q15699 326 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 ZBED5Q49AG3 693 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 PGM2L1Q6PCE3 622 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 FIBCD1Q8N539 461 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 ADAMTS16Q8TE57 1224 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 PDCD6IPQ8WUM4 868 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 MAP6Q96JE9 813 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 VPS35Q96QK1 796 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 MRPL9Q9BYD2 267 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 IKZF4Q9H2S9 585 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 VPS45Q9NRW7 570 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 HOXC10Q9NYD6 342 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 KCNK4Q9NYG8 393 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 C6orf203Q9P0P8 240 aaPredicted RBP12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 RIMS3Q9UJD0 308 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.34
SLC28A1-203ENST00000394573 MYO3BQ8WXR4 1341 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 AURKAO14965 403 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 JRKO75564 520 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 UFL1O94874 794 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 EIF2S1P05198 315 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 PRKACAP17612 351 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 SOX5P35711 763 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 GAD2Q05329 585 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 PPP2R5DQ14738 602 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 ABCB5Q2M3G0 1257 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 SNAP47Q5SQN1 464 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CHST15Q7LFX5 561 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FIG4Q92562 907 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 RIC8BQ9NVN3 520 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 BOLA1Q9Y3E2 137 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 I3L4J1 428 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 ERBB2P04626 1255 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CAPN1P07384 714 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CALML3P27482 149 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 MAP4P27816 1152 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 POLR2BP30876 1174 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 GJC1P36383 396 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 OPRL1P41146 370 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 IFITM3Q01628 133 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 NEDD8Q15843 81 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 ECM1Q16610 540 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM214AQ32MH5 1076 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM91A1Q658Y4 838 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FRMD7Q6ZUT3 714 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 OTOP3Q7RTS5 596 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 USP37Q86T82 979 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 FBXW8Q8N3Y1 598 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 ACDQ96AP0 544 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms