RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 HERVK_113Q902F9 699 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 HEMGNQ9BXL5 484 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 WDR27A2RRH5 827 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 MDM4O15151 490 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 TUBBP07437 444 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 SYN1P17600 705 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 ARSEP51690 589 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 ROR1Q01973 937 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 ADCY2Q08462 1091 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 KIAA1841Q6NSI8 718 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 SCYL2Q6P3W7 929 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 BEND5Q7L4P6 421 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 HSPH1Q92598 858 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.2■□□□□ 0.98
HDDC3-202ENST00000394272 EFR3BQ9Y2G0 817 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 CAPN9O14815 690 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 CD48P09326 243 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 KRT10P13645 584 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 PPM1AP35813 382 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 GLUD2P49448 558 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 VSNL1P62760 191 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 SLC7A5Q01650 507 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 SDHAF4Q5VUM1 108 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 BSPRYQ5W0U4 402 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 FBXO38Q6PIJ6 1188 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 NUP93Q8N1F7 819 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 CLSTN3Q9BQT9 956 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 LRRC19Q9H756 370 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.19■□□□□ 0.98
HDDC3-202ENST00000394272 STIM2Q9P246 746 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 AMACRQ9UHK6 382 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 INSL6Q9Y581 213 aa21.19■□□□□ 0.98
HDDC3-202ENST00000394272 HAPLN1P10915 354 aaPredicted RBP21.18■□□□□ 0.98
HDDC3-202ENST00000394272 NCAM1P13591 858 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 RPL17P18621 184 aaKnown RBP21.18■□□□□ 0.98
HDDC3-202ENST00000394272 CHRNA3P32297 505 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 FIBCD1Q8N539 461 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 RUBCNQ92622 972 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 CLP1Q92989 425 aaKnown RBP21.18■□□□□ 0.98
HDDC3-202ENST00000394272 MAGOHBQ96A72 148 aaKnown RBP21.18■□□□□ 0.98
HDDC3-202ENST00000394272 HTATIP2Q9BUP3 242 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 SNRNP25Q9BV90 132 aaKnown RBP21.18■□□□□ 0.98
HDDC3-202ENST00000394272 AAASQ9NRG9 546 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 RRN3Q9NYV6 651 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 IL37Q9NZH6 218 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 SLC27A5Q9Y2P5 690 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 M0QYT0 321 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 C2CD2LO14523 706 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 TJP3O95049 919 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 OR1D2P34982 312 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 DUSP4Q13115 394 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 TTC27Q6P3X3 843 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 KCTD6Q8NC69 237 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 CCDC26Q8TAB7 109 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 PGAP3Q96FM1 320 aaPredicted RBP21.18■□□□□ 0.98
HDDC3-202ENST00000394272 SLC9A7Q96T83 725 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 PCYOX1Q9UHG3 505 aa21.18■□□□□ 0.98
HDDC3-202ENST00000394272 RDXP35241 583 aaKnown RBP21.17■□□□□ 0.98
HDDC3-202ENST00000394272 MGAT5BQ3V5L5 792 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 ERMARDQ5T6L9 678 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 KAZNQ674X7 775 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 MAATS1Q7Z4T9 603 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 HERC6Q8IVU3 1022 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 STKLD1Q8NE28 680 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 FAM71BQ8TC56 605 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 PHOSPHO2Q8TCD6 241 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 SP7Q8TDD2 431 aaPredicted RBP21.17■□□□□ 0.98
HDDC3-202ENST00000394272 SPATA17Q96L03 361 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 ZBED2Q9BTP6 218 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 TRIM62Q9BVG3 475 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 ZMYND8Q9ULU4 1186 aaPredicted RBP21.17■□□□□ 0.98
HDDC3-202ENST00000394272 SCML2Q9UQR0 700 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 R3HDM2Q9Y2K5 976 aaKnown RBP21.17■□□□□ 0.98
HDDC3-202ENST00000394272 PCDHB12Q9Y5F1 795 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 SLC4A7Q9Y6M7 1214 aa21.17■□□□□ 0.98
HDDC3-202ENST00000394272 FAM92AA1XBS5 289 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 SOAT2O75908 522 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 HEXIM1O94992 359 aaKnown RBP21.16■□□□□ 0.98
HDDC3-202ENST00000394272 FNTAP49354 379 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 CDH6P55285 790 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 IFRD2Q12894 506 aaPredicted RBP21.16■□□□□ 0.98
HDDC3-202ENST00000394272 DPYSL3Q14195 570 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 PDK2Q15119 407 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 ZC3H12AQ5D1E8 599 aaKnown RBP21.16■□□□□ 0.98
HDDC3-202ENST00000394272 CCDC185Q8N715 623 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 C1orf54Q8WWF1 131 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 EDEM1Q92611 657 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 SEPT5Q99719 369 aaPredicted RBP21.16■□□□□ 0.98
HDDC3-202ENST00000394272 FBXO44Q9H4M3 255 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 GPATCH2LQ9NWQ4 482 aa21.16■□□□□ 0.98
HDDC3-202ENST00000394272 CCDC151A5D8V7 595 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 BHMG1C9JSJ3 638 aaPredicted RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 ZMYND10O75800 440 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 COILP38432 576 aaPredicted RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 YWHAGP61981 247 aaKnown RBP eCLIP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 USP46P62068 366 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 DHX34Q14147 1143 aaKnown RBP21.15■□□□□ 0.98
HDDC3-202ENST00000394272 BRD3Q15059 726 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 DPYSL2Q16555 572 aa21.15■□□□□ 0.98
HDDC3-202ENST00000394272 CA9Q16790 459 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms