RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 SLITRK1Q96PX8 696 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SMAD5Q99717 465 aaKnown RBP1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 VN1R3Q9BXE9 311 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TRIM54Q9BYV2 358 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ASPSCR1Q9BZE9 553 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TRIM5Q9C035 493 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 MYLK2Q9H1R3 596 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TMEM45AQ9NWC5 275 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 MSRB1Q9NZV6 116 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 USP22Q9UPT9 525 aa1.95□□□□□ -2.1
RNU6-1228P-201ENST00000391014 A0A088AWK7 358 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 A0A0G2JK05 382 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SLC22A23A1A5C7 686 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 M0R3H8 397 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 EXOC5O00471 708 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CTIFO43310 598 aaKnown RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TLX3O43711 291 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PRAMEF2O60811 474 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SRGAP2O75044 1071 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ATG13O75143 517 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CLSTN1O94985 981 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 IL33O95760 270 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PLAUP00749 431 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 MBPP02686 304 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 KITP10721 976 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TBXAS1P24557 533 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 HOXA7P31268 230 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 IL6STP40189 918 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PGGT1BP53609 377 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 RAB1AP62820 205 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 GPC5P78333 572 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TIAL1Q01085 375 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 AMPD3Q01432 767 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PPATQ06203 517 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PFKFB3Q16875 520 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ATAT1Q5SQI0 421 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CC2D1BQ5T0F9 858 aaKnown RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 GFI1BQ5VTD9 330 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 LMBRD2Q68DH5 695 aaPredicted RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CAPRIN2Q6IMN6 1127 aaKnown RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 VSTM1Q6UX27 236 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ZNF793Q6ZN11 406 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 RBM23Q86U06 439 aaKnown RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 NR2C2APQ86WQ0 139 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 MPP5Q8N3R9 675 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 C11orf44Q8N8P7 122 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 NUDCD2Q8WVJ2 157 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 MAML1Q92585 1016 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 HPS3Q969F9 1004 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 MIB2Q96AX9 1013 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 HSPBAP1Q96EW2 488 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 DPH1Q9BZG8 443 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SPC25Q9HBM1 224 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 XPNPEP3Q9NQH7 507 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SNX15Q9NRS6 342 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PIH1D1Q9NWS0 290 aaKnown RBP1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SEMA5BQ9P283 1151 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 FZD4Q9ULV1 537 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PCDHA12Q9UN75 941 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 STXBP5LQ9Y2K9 1186 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CDY1Q9Y6F8 540 aa1.94□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TRBV5-3A0A0A0MS03 114 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 INPPL1O15357 1258 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CD3EAPO15446 510 aaKnown RBP1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CA12O43570 354 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TMPRSS11DO60235 418 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SNUPNO95149 360 aaKnown RBP1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 SYF2O95926 243 aaKnown RBP1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CD63P08962 238 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 EPHA3P29320 983 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TACR3P29371 465 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 PRKAR1BP31321 381 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ITGA8P53708 1063 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 P2RX3P56373 397 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 FGL2Q14314 439 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ZNF267Q14586 743 aaPredicted RBP1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 NFATC4Q14934 902 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 FAM110CQ1W6H9 321 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ZNF783Q6ZMS7 281 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 RFX8Q6ZV50 586 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 FAM57BQ71RH2 274 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 B4GALNT4Q76KP1 1039 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ZNF329Q86UD4 541 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 CUZD1Q86UP6 607 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 GRAMD1CQ8IYS0 662 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 TMEM199Q8N511 208 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 OR56A3Q8NH54 315 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 LMO3Q8TAP4 145 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 OIT3Q8WWZ8 545 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 FCRL5Q96RD9 977 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 GATA5Q9BWX5 397 aaPredicted RBP1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ARHGAP39Q9C0H5 1083 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 ZMAT3Q9HA38 289 aaKnown RBP1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 USP29Q9HBJ7 922 aa1.93□□□□□ -2.1
RNU6-1228P-201ENST00000391014 H7C4K7 107 aa1.92□□□□□ -2.1
RNU6-1228P-201ENST00000391014 NTN3O00634 580 aaPredicted RBP1.92□□□□□ -2.1
RNU6-1228P-201ENST00000391014 GRID2O43424 1007 aa1.92□□□□□ -2.1
RNU6-1228P-201ENST00000391014 RGS10O43665 173 aa1.92□□□□□ -2.1
RNU6-1228P-201ENST00000391014 RASAL1O95294 804 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms