RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 DKK2Q9UBU2 259 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZNF69Q9UC07 566 aa6.19□□□□□ -1.42
RNU6-40P-201ENST00000384254 CENPVL1A0A0U1RR11 272 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZAR1LA6NP61 321 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 H0Y3Z8 333 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 ORC4O43929 436 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 TAF5LO75529 589 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 FAM155BO75949 473 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 AGR2O95994 175 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 C1SP09871 688 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZFP36P26651 326 aaKnown RBP6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 PNLIPRP1P54315 467 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 ACTR2P61160 394 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 BFSP2Q13515 415 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 TUBA3CQ13748 450 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 BMPR2Q13873 1038 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 ACOX1Q15067 660 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 PTPAQ15257 358 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 NBPF8Q3BBV2 869 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 TUBA3EQ6PEY2 450 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 RRAGAQ7L523 313 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 LCORLQ8N3X6 602 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 OR1N1Q8NGS0 311 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 HMGB4Q8WW32 186 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 ASB10Q8WXI3 467 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 SDCCAG3Q96C92 435 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 PBKQ96KB5 322 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 MAF1Q9H063 256 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 RIC8AQ9NPQ8 531 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 FSCN3Q9NQT6 498 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 FBXO28Q9NVF7 368 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 DAPP1Q9UN19 280 aa6.18□□□□□ -1.42
RNU6-40P-201ENST00000384254 PIPSLA2A3N6 862 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 A8MVJ9 347 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 FOXD2O60548 495 aaPredicted RBP6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 RPP40O75818 363 aaKnown RBP6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 LARGE1O95461 756 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 PYGLP06737 847 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 CREB1P16220 341 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZFXP17010 805 aaPredicted RBP6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 XBP1P17861 261 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 HTR7P34969 479 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 PRKAA2P54646 552 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 SF3A3Q12874 501 aaKnown RBP eCLIP6.17□□□□□ -1.422e-23■■■■■ 136.9
RNU6-40P-201ENST00000384254 TBX2Q13207 712 aaPredicted RBP6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 SEMA3BQ13214 749 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 CUL4BQ13620 913 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 EFR3AQ14156 821 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 PTPRRQ15256 657 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 SLC4A8Q2Y0W8 1093 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 TRIM60Q495X7 471 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 TRABD2AQ86V40 505 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 TMEM57Q8N5G2 664 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 SIRT6Q8N6T7 355 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 NAXEQ8NCW5 288 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 CACTINQ8WUQ7 758 aaKnown RBP6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 OVCA2Q8WZ82 227 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 Q96MF0 132 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 EIF2AK1Q9BQI3 630 aaKnown RBP6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 CCDC134Q9H6E4 229 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 PDP2Q9P2J9 529 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 FEM1BQ9UK73 627 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 CNTN6Q9UQ52 1028 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 ADGRA2Q96PE1 1338 aa6.17□□□□□ -1.42
RNU6-40P-201ENST00000384254 MPPED1O15442 326 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 KRT38O76015 456 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 CER1O95813 267 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 TK1P04183 234 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 IL6RP08887 468 aaPredicted RBP6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZNF37AP17032 561 aaPredicted RBP6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 RXRAP19793 462 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 MMP8P22894 467 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 SERPINA4P29622 427 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 DDIT3P35638 169 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 PBX1P40424 430 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 FOLR3P41439 243 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 MCM2P49736 904 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 CBFBQ13951 182 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 SPATS1Q496A3 300 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 TTC22Q5TAA0 569 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 CCDC144NLQ6NUI1 221 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 LVRNQ6Q4G3 990 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 LRRTM4Q86VH4 590 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 CLASRPQ8N2M8 674 aaKnown RBP6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 METTL25Q8N6Q8 603 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 REXO5Q96IC2 774 aaKnown RBP6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 FAR2Q96K12 515 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 C1QTNF3Q9BXJ4 246 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 WDR11Q9BZH6 1224 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 VPS16Q9H269 839 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 SNX15Q9NRS6 342 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 LIN7CQ9NUP9 197 aaKnown RBP6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 TMLHEQ9NVH6 421 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 BAG5Q9UL15 447 aa6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 UBE2J1Q9Y385 318 aaPredicted RBP6.16□□□□□ -1.42
RNU6-40P-201ENST00000384254 KIF28PB7ZC32 967 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 E7EVH7 732 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 CES2O00748 559 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms