RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 A0A087WZ62 844 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 SERPINE1P05121 402 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 HNRNPCP07910 306 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■□□□ 12.9
DNMT3A-204ENST00000380756 PAEPP09466 180 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 KCNA4P22459 653 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 GLRBP48167 497 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ZCCHC23Q6ZST2 131 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ZNF398Q8TD17 642 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 RMDN1Q96DB5 314 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 SIGLEC16A6NMB1 481 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 WNT10BO00744 389 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 PMPCBO75439 489 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 TGFB3P10600 412 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 HOXD10P28358 340 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 RBL1P28749 1068 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 DSG3P32926 999 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 PNPLA4P41247 253 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 MPP3Q13368 585 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ANO4Q32M45 955 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 C9orf131Q5VYM1 1079 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 IRGCQ6NXR0 463 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 BNC2Q6ZN30 1099 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ACSS3Q9H6R3 686 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 TRPC5OSA6NMA1 111 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ACKR2O00590 384 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ALOX15BO15296 676 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 SRP72O76094 671 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ITGAVP06756 1048 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 GLRA2P23416 452 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 SLC26A2P50443 739 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 ARHGDIAP52565 204 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 NCKAP1LP55160 1127 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 FAM83EQ2M2I3 478 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 BBS12Q6ZW61 710 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 LINC00523Q86TU6 105 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 RMDN2Q96LZ7 410 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 SIX2Q9NPC8 291 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 A1CFQ9NQ94 594 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 STX18Q9P2W9 335 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 PGK2P07205 417 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 KCNA2P16389 499 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 NUP93Q8N1F7 819 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 OR5B17Q8NGF7 314 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 CAAP1Q9H8G2 361 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 KCNK4Q9NYG8 393 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 KLK14Q9P0G3 267 aa13.13□□□□□ -0.31
DNMT3A-204ENST00000380756 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 XPO1O14980 1071 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 BNIP3LO60238 219 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 MICAL2O94851 1124 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 LYPLA2O95372 231 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 PCSK1P29120 753 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 GP5P40197 560 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 RIPK1Q13546 671 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 IMPG1Q17R60 797 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 ZNF484Q5JVG2 852 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 CNBD2Q96M20 576 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 KLHL4Q9C0H6 718 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 PKD2L2Q9NZM6 624 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 TRDMT1O14717 391 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 BANF1O75531 89 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 ACO1P21399 889 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 PTDSS1P48651 473 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 SLC1A6P48664 564 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 ABCE1P61221 599 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 TBL3Q12788 808 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 UGCGQ16739 394 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 ZNF184Q99676 751 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 VTNP04004 478 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 HMGCRP04035 888 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 STMN1P16949 149 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 PEX5P50542 639 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 CPB2Q96IY4 423 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 ASB7Q9H672 318 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 PIH1D1Q9NWS0 290 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 MYH10P35580 1976 aa13.12□□□□□ -0.31
DNMT3A-204ENST00000380756 C2CD2LO14523 706 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms