RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
PCNA-201ENST00000379143 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 BSPRYQ5W0U4 402 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 BTBD8Q5XKL5 378 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 PARM1Q6UWI2 310 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 TOGARAM2Q6ZUX3 1019 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 BEND5Q7L4P6 421 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCNA-201ENST00000379143 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 ARL14EPQ8N8R7 260 aaPredicted RBP12.5□□□□□ -0.41
PCNA-201ENST00000379143 DEPDC1BQ8WUY9 529 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 FGF14Q92915 247 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 C18orf8Q96DM3 657 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 NMUR1Q9HB89 426 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCNA-201ENST00000379143 ARHGAP26Q9UNA1 814 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 NUMBLQ9Y6R0 609 aa12.5□□□□□ -0.41
PCNA-201ENST00000379143 YJEFN3A6XGL0 299 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 E7ENQ6 273 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 PIK3R2O00459 728 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 COCHO43405 550 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 MFAP3LO75121 409 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 LTFP02788 710 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 TCF3P15923 654 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 MMP8P22894 467 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 FCARP24071 287 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 CDC25BP30305 580 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 CENPCQ03188 943 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 GOLGA8FQ08AF8 430 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 GOLGA8DPQ0D2H9 430 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 TBX2Q13207 712 aaPredicted RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 TDGQ13569 410 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 RSRC2Q7L4I2 434 aaKnown RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 BHLHA9Q7RTU4 235 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 RNF135Q8IUD6 432 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 MFSD6LQ8IWD5 586 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 KIAA1958Q8N8K9 716 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 RNF139Q8WU17 664 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 CPA5Q8WXQ8 436 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 USP13Q92995 863 aaPredicted RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 CYP2S1Q96SQ9 504 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 DNAJC7Q99615 494 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 SYT11Q9BT88 431 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 ABHD10Q9NUJ1 306 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 THG1LQ9NWX6 298 aaKnown RBP12.49□□□□□ -0.41
PCNA-201ENST00000379143 OSER1Q9NX31 292 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 DNMT3LQ9UJW3 386 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 STRIP2Q9ULQ0 834 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 SORCS3Q9UPU3 1222 aa12.49□□□□□ -0.41
PCNA-201ENST00000379143 GOLGA6L3A6NEY3 463 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 HEPACAM2A8MVW5 462 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 PRR33A8MZF0 331 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 HSF2BPO75031 334 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 ERBB2P04626 1255 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 CALB1P05937 261 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
PCNA-201ENST00000379143 GZMAP12544 262 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 PSMC3P17980 439 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 SCNN1AP37088 669 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 PGFP49763 221 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
PCNA-201ENST00000379143 YWHAZP63104 245 aaKnown RBP12.48□□□□□ -0.41
PCNA-201ENST00000379143 SLC6A3Q01959 620 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 C10orf120Q5SQS8 335 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 OR6B2Q6IFH4 312 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 ZNF571Q7Z3V5 609 aaPredicted RBP12.48□□□□□ -0.41
PCNA-201ENST00000379143 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.48□□□□□ -0.41
PCNA-201ENST00000379143 PHF13Q86YI8 300 aaPredicted RBP12.48□□□□□ -0.41
PCNA-201ENST00000379143 SLC44A3Q8N4M1 653 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 FAM149B1Q96BN6 582 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 SLC22A12Q96S37 553 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 PCDHB18PQ96TA0 734 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 POPDC2Q9HBU9 364 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 CPQQ9Y646 472 aa12.48□□□□□ -0.41
PCNA-201ENST00000379143 HELZP42694 1942 aaKnown RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 GOLGA6L6A8MZA4 724 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 CAPN9O14815 690 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 ADCY5O95622 1261 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 ASGR2P07307 311 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 SKILP12757 684 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 NCAM1P13591 858 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 VIPR2P41587 438 aa12.47□□□□□ -0.41
PCNA-201ENST00000379143 KPNA1P52294 538 aaPredicted RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 GSCP56915 257 aaPredicted RBP12.47□□□□□ -0.41
PCNA-201ENST00000379143 COG7P83436 770 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms