RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ITGALP20701 1170 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 CRYBB1P53674 252 aaPredicted RBP20.32■□□□□ 0.84
PCDH8-202ENST00000377942 ALDH18A1P54886 795 aaKnown RBP20.32■□□□□ 0.84
PCDH8-202ENST00000377942 NCKAP1LP55160 1127 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 POTEAQ6S8J7 498 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 HS6ST3Q8IZP7 471 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 APBB2Q92870 758 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 KLF6Q99612 283 aaPredicted RBP20.32■□□□□ 0.84
PCDH8-202ENST00000377942 TMEM121Q9BTD3 319 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 SLC7A5P2Q9GIP4 190 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 CDT1Q9H211 546 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 MANSC1Q9H8J5 431 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 NPHS2Q9NP85 383 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 ASTN1O14525 1302 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 CASP5P51878 434 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 MARC1Q5VT66 337 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 ADCK2Q7Z695 626 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 BHMTQ93088 406 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 MRPL1Q9BYD6 325 aaKnown RBP20.32■□□□□ 0.84
PCDH8-202ENST00000377942 CASZ1Q86V15 1759 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 H0Y3Z8 333 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 SERPINB8P50452 374 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 SNX31Q8N9S9 440 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 TRHDEQ9UKU6 1024 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 IGF2BP3O00425 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 CLASP2O75122 1294 aaKnown RBP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 MTM1Q13496 603 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 DUSP28Q4G0W2 176 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 DEFB106AQ8N104 65 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 HSFY1Q96LI6 401 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 POPDC2Q9HBU9 364 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 MYL4P12829 197 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 DNAJB2P25686 324 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 PGM1P36871 562 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 TREML2Q5T2D2 321 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 KIAA0319LQ8IZA0 1049 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 RIN2Q8WYP3 895 aaPredicted RBP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 EDEM1Q92611 657 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 SLC24A2Q9UI40 661 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 RAMP2O60895 175 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 SRP72O76094 671 aaKnown RBP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 MAP3K6O95382 1288 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 SLURP2P0DP57 97 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 ZBTB48P10074 688 aaPredicted RBP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 KLRC2P26717 231 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 LRRC8EQ6NSJ5 796 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 RGS9BPQ6ZS82 235 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 PPTC7Q8NI37 304 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 RMDN2Q96LZ7 410 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 SYT17Q9BSW7 474 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 AP5Z1O43299 807 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 XYLBO75191 536 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 H2AFYO75367 372 aaKnown RBP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 STMN1P16949 149 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 PLA2G4AP47712 749 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 ANO5Q75V66 913 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 ST13P4Q8IZP2 240 aaPredicted RBP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 PIP4K2CQ8TBX8 421 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 DCLK3Q9C098 648 aa20.31■□□□□ 0.84
PCDH8-202ENST00000377942 RBM22Q9NW64 420 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCDH8-202ENST00000377942 HACD1B0YJ81 288 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 LTFP02788 710 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 ZBTB41Q5SVQ8 909 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 TNFRSF25Q93038 417 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 PURBQ96QR8 312 aaKnown RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 LSP1P33241 339 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 CYP2C18P33260 490 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 IL17AQ16552 155 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 PRAMEF19Q5SWL8 479 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 CMTM5Q96DZ9 223 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 PSD3Q9NYI0 1048 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 TRPC5OSA6NMA1 111 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 MYO1CO00159 1063 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 SERPINF2P08697 491 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 PTPN1P18031 435 aaKnown RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 ZNF284Q2VY69 593 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 C12orf56Q8IXR9 622 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 COLGALT1Q8NBJ5 622 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 FBXO25Q8TCJ0 367 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 KCNK16Q96T55 309 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 MEFVO15553 781 aaPredicted RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 ADCY6O43306 1168 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 LZTS3O60299 673 aaPredicted RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 RPL9P32969 192 aaKnown RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 ZNF280AP59817 542 aaPredicted RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 POU4F1Q01851 419 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 EVX2Q03828 476 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 PDCD2Q16342 344 aaPredicted RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 MSL3Q8N5Y2 521 aaKnown RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 TRIML2Q8N7C3 387 aa20.3■□□□□ 0.84
PCDH8-202ENST00000377942 ZNF557Q8N988 423 aaPredicted RBP20.3■□□□□ 0.84
PCDH8-202ENST00000377942 TISP43B9A030 160 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 PGK1P00558 417 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ADRB2P07550 413 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 HIST2H2ACQ16777 129 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 PABPC1LQ4VXU2 614 aaKnown RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 HIST2H2AA3Q6FI13 130 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 SLC26A11Q86WA9 606 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 AGGF1Q8N302 714 aaeCLIP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms