RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 KRT75O95678 551 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 GLUD1P00367 558 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 MRPS6P82932 125 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 Q4G0T1 1027 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 OTOP1Q7RTM1 612 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 CCDC33Q8N5R6 958 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 LACRTQ9GZZ8 138 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 MARCOQ9UEW3 520 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 PSMD12O00232 456 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 IFRD1O00458 451 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 DARSP14868 501 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 MUTP22033 750 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 SERPINB10P48595 397 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 CARSP49589 748 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 CENPCQ03188 943 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 GET4Q7L5D6 327 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 ATXN7L3BQ96GX2 97 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 UBXN8O00124 270 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 GFAPP14136 432 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 LAMTOR4Q0VGL1 99 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 KCTD19Q17RG1 926 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 DNAL1Q4LDG9 190 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 ZC3H12BQ5HYM0 836 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF720Q7Z2F6 126 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 REXO1L1PQ8IX06 675 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 NLNQ9BYT8 704 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 EXO5Q9H790 373 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 DDX43Q9NXZ2 648 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 NRCAMQ92823 1304 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 XPO1O14980 1071 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 LAG3P18627 525 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 AKAP5P24588 427 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 EPHB2P29323 1055 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 MAP3K7CLP57077 242 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 FPGSQ05932 587 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 TRIP10Q15642 601 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 GPAT2Q6NUI2 795 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 RETSATQ6NUM9 610 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 KIRREL3Q8IZU9 778 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 PNKPQ96T60 521 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 PKD2L2Q9NZM6 624 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 M0QYT0 321 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 BMP6P22004 513 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 CASP5P51878 434 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 HPCAP84074 193 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 CAMK2GQ13555 558 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 FAM110CQ1W6H9 321 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 OSCP1Q8WVF1 389 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 PPP1R16AQ96I34 528 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 RANBP17Q9H2T7 1088 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 TMEM8AQ9HCN3 771 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 LNPEPQ9UIQ6 1025 aa11.17□□□□□ -0.62
HIF3A-205ENST00000377670 SMG5Q9UPR3 1016 aaKnown RBP11.17□□□□□ -0.62
HIF3A-205ENST00000377670 AKAP12Q02952 1782 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 ZNF263O14978 683 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 COMTP21964 271 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 PKN2Q16513 984 aaKnown RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 HIF1AQ16665 826 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 USP41Q3LFD5 358 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 ATL2Q8NHH9 583 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 IL31RAQ8NI17 732 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 TAS1R2Q8TE23 839 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 ERGIC2Q96RQ1 377 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CACNA2D2Q9NY47 1150 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 C5orf58C9J3I9 102 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CBX4O00257 560 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 MEIS2O14770 477 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 TSPAN3O60637 253 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 PHF2O75151 1096 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 LGALS2P05162 132 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 YWHAQP27348 245 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 TYK2P29597 1187 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CSE1LP55060 971 aaKnown RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CRYMQ14894 314 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 NAIF1Q69YI7 327 aaPredicted RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 PSRC1Q6PGN9 363 aaPredicted RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 SPIRE2Q8WWL2 714 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 EME1Q96AY2 570 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 GEMIN8Q9NWZ8 242 aaKnown RBP11.16□□□□□ -0.62
HIF3A-205ENST00000377670 CAPN6Q9Y6Q1 641 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 KRT20P35900 424 aa11.16□□□□□ -0.62
HIF3A-205ENST00000377670 NAB2Q15742 525 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms