RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SUN1O94901 812 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ADRA1DP25100 572 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 TKTP29401 623 aaKnown RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ELK3P41970 407 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ARL4CP56559 192 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SLC6A3Q01959 620 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 KCTD2Q14681 263 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 FAM47CQ5HY64 1035 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF398Q8TD17 642 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 C18orf25Q96B23 403 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SLC15A5A6NIM6 579 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 FAM159BA6NKW6 160 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 CHUKO15111 745 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 GCATO75600 419 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ALDH1A2O94788 518 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 DLDP09622 509 aaKnown RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SETSIPP0DME0 302 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 KRT4P19013 534 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 GNAZP19086 355 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 MAP2K2P36507 400 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ADCY1Q08828 1119 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 PDK2Q15119 407 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 PARP6Q2NL67 630 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 C9orf57Q5W0N0 161 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 KLHDC8BQ8IXV7 354 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 GBP7Q8N8V2 638 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 MCUQ8NE86 351 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SPATA18Q8TC71 538 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 DCPSQ96C86 337 aaKnown RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 MAML3Q96JK9 1138 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SIGLEC10Q96LC7 697 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 KCTD15Q96SI1 283 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 MIPEPQ99797 713 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ADPGKQ9BRR6 497 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ASNSD1Q9NWL6 643 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 PCSK1NQ9UHG2 260 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 C2CD2LO14523 706 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 F2P00734 622 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ATXN1P54253 815 aaKnown RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ROR1Q01973 937 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SOX4Q06945 474 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 NIPAL4Q0D2K0 466 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ZKSCAN8Q15776 578 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SNCBQ16143 134 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 DCAF4L1Q3SXM0 396 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 DUSP28Q4G0W2 176 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF618Q5T7W0 954 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 PAQR9Q6ZVX9 377 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 SLC26A9Q7LBE3 791 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 CRYBG2Q8N1P7 616 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 HSPH1Q92598 858 aa9.99□□□□□ -0.81
TRIM39-202ENST00000376659 PRR11Q96HE9 360 aaPredicted RBP9.99□□□□□ -0.81
TRIM39-202ENST00000376659 TTC36A6NLP5 189 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 METTL18O95568 372 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 RBP3P10745 1247 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 IGFBP6P24592 240 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 RBP5P82980 135 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 IL9RQ01113 521 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 HADHQ16836 314 aaKnown RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KIAA0319Q5VV43 1072 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 MPP5Q8N3R9 675 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 CCDC63Q8NA47 563 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 RFWD2Q8NHY2 731 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 APOPT1Q96IL0 206 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 TBCBQ99426 244 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 B3GNT5Q9BYG0 378 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 ETNK2Q9NVF9 386 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 DOCK4Q8N1I0 1966 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 CHD5Q8TDI0 1954 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 TPSB2P20231 275 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 OSBPP22059 807 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 STIP1P31948 543 aaKnown RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 STX2P32856 288 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SEMA3BQ13214 749 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SEMA5AQ13591 1074 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 TPSAB1Q15661 275 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KLHL38Q2WGJ6 581 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KBTBD12Q3ZCT8 623 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 LVRNQ6Q4G3 990 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 C3orf62Q6ZUJ4 267 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 CYS1Q717R9 158 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 CCDC185Q8N715 623 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KCTD6Q8NC69 237 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 RNF169Q8NCN4 708 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 ARRDC4Q8NCT1 418 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 NPLOC4Q8TAT6 608 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 ZSCAN18Q8TBC5 510 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 TCP10LQ8TDR4 215 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 NT5C1AQ9BXI3 368 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 VPS11Q9H270 941 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 MOCS1Q9NZB8 636 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SF3B1O75533 1304 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SHROOM3Q8TF72 1996 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 CCDC189A1A4V9 331 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms