RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TMEM154Q6P9G4 183 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 LRRC6Q86X45 466 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 APLFQ8IW19 511 aaPredicted RBP11.34□□□□□ -0.59
MDC1-201ENST00000376406 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 TINF2Q9BSI4 451 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
MDC1-201ENST00000376406 CCDC90BQ9GZT6 254 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 CISHQ9NSE2 258 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 PRG3Q9Y2Y8 225 aaPredicted RBP11.34□□□□□ -0.59
MDC1-201ENST00000376406 PCDHA3Q9Y5H8 950 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 GAKO14976 1311 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 M0QYT0 321 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 ADCY6O43306 1168 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 HSPA13P48723 471 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 SLC25A41Q8N5S1 370 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 ZNF669Q96BR6 464 aaPredicted RBP11.34□□□□□ -0.59
MDC1-201ENST00000376406 NFIBO00712 420 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 DSG1Q02413 1049 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 ZNF662Q6ZS27 426 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 CCDC126Q96EE4 140 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 FAR2Q96K12 515 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 ELOVL4Q9GZR5 314 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 CD274Q9NZQ7 290 aa11.34□□□□□ -0.59
MDC1-201ENST00000376406 LRRC10BA6NIK2 292 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 GEMP55040 296 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 KCNMA1Q12791 1236 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 MAP2K5Q13163 448 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 FBXO47Q5MNV8 452 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 TMC3Q7Z5M5 1100 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.59
MDC1-201ENST00000376406 EME1Q96AY2 570 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 CNPY3Q9BT09 278 aa11.33□□□□□ -0.59
MDC1-201ENST00000376406 SETD1AO15047 1707 aaKnown RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 ASS1P00966 412 aaKnown RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 PEX6Q13608 980 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PAFAH2Q99487 392 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 GIMAP4Q9NUV9 329 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 SLC39A10Q9ULF5 831 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PCDHB5Q9Y5E4 795 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 COL1A2P08123 1366 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PRPF4O43172 522 aaKnown RBP eCLIP11.33□□□□□ -0.6
MDC1-201ENST00000376406 TBC1D4O60343 1298 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 KBTBD12Q3ZCT8 623 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 FAM172AQ8WUF8 416 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 ILKAPQ9H0C8 392 aaPredicted RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 SERPINB10P48595 397 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 KRT72Q14CN4 511 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 ARHGEF19Q8IW93 802 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 FAM9CQ8IZT9 166 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 CPB2Q96IY4 423 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 TMEM121Q9BTD3 319 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 TIMM44O43615 452 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 DYRK3O43781 588 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 MBL2P11226 248 aaPredicted RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 GCNT1Q02742 428 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 AGAP9Q5VTM2 703 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PTRHD1Q6GMV3 140 aaKnown RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 UBE2OQ9C0C9 1292 aaKnown RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 BRD8Q9H0E9 1235 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 NFASCO94856 1347 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 E2F8A0AVK6 867 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
MDC1-201ENST00000376406 IRF1P10914 325 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 PTPRAP18433 802 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 SMARCB1Q12824 385 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 NT5DC3Q86UY8 548 aa11.33□□□□□ -0.6
MDC1-201ENST00000376406 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 GHRP10912 638 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CALB2P22676 271 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 MRPS35P82673 323 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 DDR1Q08345 913 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 EIF1ADQ8N9N8 165 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 RSPH1Q8WYR4 309 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SLC24A3Q9HC58 644 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 RIC8BQ9NVN3 520 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 SCAF8Q9UPN6 1271 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 XRN1Q8IZH2 1706 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 BTNL10A8MVZ5 291 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SPDYAQ5MJ70 313 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 OR9Q1Q8NGQ5 310 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 FBXO25Q8TCJ0 367 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 DTNBP1Q96EV8 351 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SIK3Q9Y2K2 1263 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 ADAMTSL3P82987 1691 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
MDC1-201ENST00000376406 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
MDC1-201ENST00000376406 ACADSP16219 412 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms