RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 ACLYP53396 1101 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 TUSC3Q13454 348 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 MRNIPQ6NTE8 343 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SLC13A5Q86YT5 568 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 MCOLN2Q8IZK6 566 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ZNF557Q8N988 423 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 B3GALNT2Q8NCR0 500 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ARNTL2Q8WYA1 636 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 OSGEPL1Q9H4B0 414 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SMARCAL1Q9NZC9 954 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 MRPL42Q9Y6G3 142 aaKnown RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SRP72O76094 671 aaKnown RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ITGALP20701 1170 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 BRCC3P46736 316 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 GABPB1Q06547 395 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 PTK7Q13308 1070 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ZNF697Q5TEC3 545 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 JAMLQ86YT9 394 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 C9orf72Q96LT7 481 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 FICDQ9BVA6 458 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SEZ6LQ9BYH1 1024 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 COL20A1Q9P218 1284 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 CRTAMO95727 393 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ADRB2P07550 413 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 ESRRAP11474 423 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 NPR3P17342 541 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 NCKAP1LP55160 1127 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SESN3P58005 492 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 CCZ1BP86790 482 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 FPGSQ05932 587 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 NAA25Q14CX7 972 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 NFIL3Q16649 462 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 RGL4Q8IZJ4 473 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 STAMBPL1Q96FJ0 436 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 PACSIN1Q9BY11 444 aa13.5□□□□□ -0.25
CACNA1F-202ENST00000376251 E2F8A0AVK6 867 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 E5RJQ4 531 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 IGSF6O95976 241 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 COILP38432 576 aaPredicted RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 CBWD6Q4V339 395 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 CBWD3Q5JTY5 395 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 CBWD5Q5RIA9 395 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 PHACTR4Q8IZ21 702 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 LPCAT1Q8NF37 534 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 EFHD1Q9BUP0 239 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 TKTL2Q9H0I9 626 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 TRMT6Q9UJA5 497 aaKnown RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SYNDIG1LA6NDD5 238 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SCAMP3O14828 347 aaKnown RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 CARSP49589 748 aaKnown RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 ITGA8P53708 1063 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 RTP1P59025 263 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 IFT88Q13099 833 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SPOCD1Q6ZMY3 1216 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SERPINI1Q99574 410 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 XAB2Q9HCS7 855 aaKnown RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 VAV3Q9UKW4 847 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 NDUFS2O75306 463 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 OTUD4Q01804 1114 aaKnown RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 C3orf62Q6ZUJ4 267 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 NUP93Q8N1F7 819 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 RAB23Q9ULC3 237 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 VANGL2Q9ULK5 521 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 KPNA3O00505 521 aaPredicted RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 RARGP13631 454 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SYN1P17600 705 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 TGM2P21980 687 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 MZF1P28698 734 aaPredicted RBP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 MORF4L2Q15014 288 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 E2F4Q16254 413 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 FIGNQ5HY92 759 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 PPP2R2DQ66LE6 453 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 ITM2BQ9Y287 266 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 OR6C75A6NL08 312 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 NCAM2O15394 837 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SPDYE7PQ495Y7 208 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 DDX42Q86XP3 938 aaKnown RBP eCLIP13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 SLC26A7Q8TE54 656 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 VCX3AQ9NNX9 186 aa13.49□□□□□ -0.25
CACNA1F-202ENST00000376251 RBAK-RBAKDNI3L0D1 243 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 CLTBP09497 229 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 TEKT4Q8WW24 435 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 SPAG6O75602 509 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 MTFR1Q15390 333 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 RNF186Q9NXI6 227 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 FBXO10Q9UK96 956 aa13.48□□□□□ -0.25
CACNA1F-202ENST00000376251 TLL2Q9Y6L7 1015 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms