RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 BBOF1Q8ND07 529 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 HASPINQ8TF76 798 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 TTPALQ9BTX7 342 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 GPR62Q9BZJ7 368 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 ZWILCHQ9H900 591 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 FZD10Q9ULW2 581 aa11.6□□□□□ -0.55
PDPN-202ENST00000376057 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 BDNFP23560 247 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 IL4RP24394 825 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 CARSP49589 748 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 CBLBQ13191 982 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 SH3PXD2AQ5TCZ1 1133 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 FAM171A1Q5VUB5 890 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 SLC8B1Q6J4K2 584 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 CCDC105Q8IYK2 499 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 RNF157Q96PX1 679 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 TMEM209Q96SK2 561 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 FBXO44Q9H4M3 255 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 IL23AQ9NPF7 189 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ZDHHC18Q9NUE0 388 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 SCML2Q9UQR0 700 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 PIK3R2O00459 728 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 GRAP2O75791 330 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ITIH2P19823 946 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 L1CAMP32004 1257 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 NDUFV1P49821 464 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 GATMP50440 423 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 VCPP55072 806 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 CTXN3Q4LDR2 81 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 GPRIN1Q7Z2K8 1008 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 DEFB128Q7Z7B8 93 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 PIK3R5Q8WYR1 880 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ART4Q93070 314 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 SNRNP25Q9BV90 132 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 TSPYL1Q9H0U9 437 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 PRDM10Q9NQV6 1147 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 MTRRQ9UBK8 725 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 R3HDM2Q9Y2K5 976 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 PRG3Q9Y2Y8 225 aaPredicted RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 KLRC2P26717 231 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 HTR7P34969 479 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 HSPA9P38646 679 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
PDPN-202ENST00000376057 CASP8Q14790 479 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 USP41Q3LFD5 358 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 SLC39A12Q504Y0 691 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ALLCQ8N6M5 410 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 HERC2P3Q9BVR0 1158 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 FOXP3Q9BZS1 431 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ACBD3Q9H3P7 528 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 ABCC13Q9NSE7 274 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.59□□□□□ -0.55
PDPN-202ENST00000376057 PCSK1NQ9UHG2 260 aa11.59□□□□□ -0.55
PDPN-202ENST00000376057 YJEFN3A6XGL0 299 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 E7ENQ6 273 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 PI4K2BG5E9Z4 385 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 LAG3P18627 525 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 IVDP26440 423 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 NR2C2P49116 596 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 CXCR3P49682 368 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 SULT1E1P49888 294 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 WDR5P61964 334 aaKnown RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 XRCC4Q13426 336 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ANKRD20A8PQ5CZ79 823 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ALS2CLQ60I27 953 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ADAT2Q7Z6V5 191 aaKnown RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 CCDC89Q8N998 374 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 C1orf54Q8WWF1 131 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 HEMGNQ9BXL5 484 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 TXLNGYQ9BZA5 131 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 NGRNQ9NPE2 291 aaKnown RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 MTMR10Q9NXD2 777 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 GRHL1Q9NZI5 618 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 OGFRQ9NZT2 677 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 RAD54BQ9Y620 910 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ZMYND10O75800 440 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 SEC31AO94979 1220 aaKnown RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 HSPA1AP0DMV8 641 aaKnown RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 HSPA1BP0DMV9 641 aaKnown RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 PSEN1P49768 467 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 CDH6P55285 790 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ATP11AP98196 1134 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ADCY2Q08462 1091 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 DCAF6Q58WW2 860 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 ACBD5Q5T8D3 534 aaPredicted RBP11.58□□□□□ -0.56
PDPN-202ENST00000376057 MSANTD2Q6P1R3 559 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 NUP93Q8N1F7 819 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 FBXW11Q9UKB1 542 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 NFU1Q9UMS0 254 aa11.58□□□□□ -0.56
PDPN-202ENST00000376057 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
PDPN-202ENST00000376057 SMAPO00193 183 aa11.57□□□□□ -0.56
PDPN-202ENST00000376057 CST8O60676 142 aa11.57□□□□□ -0.56
PDPN-202ENST00000376057 USP17L7P0C7H9 530 aa11.57□□□□□ -0.56
PDPN-202ENST00000376057 HAPLN1P10915 354 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms