RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MZT2BQ6NZ67 158 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 DSTYKQ6XUX3 929 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MYLK2Q9H1R3 596 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 LMCD1Q9NZU5 365 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 COX16Q9P0S2 106 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 PHF11Q9UIL8 331 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TBX20Q9UMR3 447 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 COG2Q14746 738 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SV2CQ496J9 727 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TCHHL1Q5QJ38 904 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 PRPF4O43172 522 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TPP2P29144 1249 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MAGEA10P43363 369 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 DCAF4L1Q3SXM0 396 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 INO80DQ53TQ3 878 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ZBTB41Q5SVQ8 909 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MROH9Q5TGP6 573 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SFRP1Q8N474 314 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 LZTR1Q8N653 840 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF75CPQ92670 426 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 RPS6KL1Q9Y6S9 549 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ASB14A6NK59 587 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TRIM13O60858 407 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 VCAM1P19320 739 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 NFIAQ12857 509 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 EIF2B5Q13144 721 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 EPHA10Q5JZY3 1008 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 GALNT15Q8N3T1 639 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ACTRT2Q8TDY3 377 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 DIS3LQ8TF46 1054 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 LACRTQ9GZZ8 138 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 IRGMA1A4Y4 181 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 NAMPTP43490 491 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MARSP56192 900 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 FCHO2Q0JRZ9 810 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SNX31Q8N9S9 440 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TP53INP1Q96A56 240 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 NMD3Q96D46 503 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 CDK5RAP1Q96SZ6 601 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 OSBPL10Q9BXB5 764 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF335Q9H4Z2 1342 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MGRN1O60291 552 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 FKBP9O95302 570 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SLC16A2P36021 539 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 IREB2P48200 963 aaKnown RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 KPNA1P52294 538 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MTTPP55157 894 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TRAF3Q13114 568 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 SPATS1Q496A3 300 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 TRIQKQ629K1 86 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 PI16Q6UXB8 463 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 MDM1Q8TC05 714 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 DAPK2Q9UIK4 370 aa10.5□□□□□ -0.73
PTCH1-204ENST00000375290 POU4F1Q01851 419 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 INSCQ1MX18 579 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 MFSD4BQ5TF39 518 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 IQCKQ8N0W5 287 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 OR7A2PQ8NGA2 310 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 C2orf81A6NN90 581 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ZCCHC18P0CG32 403 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 KCNA1Q09470 495 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ZFAND2BQ8WV99 257 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 C17orf80Q9BSJ5 609 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 SPATA16Q9BXB7 569 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TJP2Q9UDY2 1190 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CYP1A1P04798 512 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 NPY2RP49146 381 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 RNF219Q5W0B1 726 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ANKMY2Q8IV38 441 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TDRD5Q8NAT2 981 aaKnown RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 A0A087X1B8 175 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 PLK4O00444 970 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 FCHO1O14526 889 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 SREBF1P36956 1147 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF846Q147U1 533 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 KIF22Q14807 665 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CATSPER4Q7RTX7 472 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ATP6V1HQ9UI12 483 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 PRR36Q9H6K5 1346 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CARNS1A5YM72 827 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 C19orf81C9J6K1 198 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 USP17L10C9JJH3 530 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CASP1P29466 404 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CSNK2BP67870 215 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CDH17Q12864 832 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 DHRSXQ8N5I4 330 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 NLRP4Q96MN2 994 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 OLA1Q9NTK5 396 aaKnown RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TRIM10Q9UDY6 481 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 PCSK1NQ9UHG2 260 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TGFBR2P37173 567 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 C16orf72Q14CZ0 275 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 SPATA20Q8TB22 786 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF507Q8TCN5 953 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 DCPSQ96C86 337 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms