RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 USP18Q9UMW8 372 aa22.85■■□□□ 1.25
CCDC28B-201ENST00000373602 BICDL2A1A5D9 508 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 ANTXRLA6NF34 631 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 BIN1O00499 593 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 AXIN1O15169 862 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 HOXC11O43248 304 aaPredicted RBP22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 LRP3O75074 770 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 APBB3O95704 486 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 CHRM1P11229 460 aaPredicted RBP22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 GRIA2P42262 883 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 PLA2G4AP47712 749 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 GOLGA8FQ08AF8 430 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 GOLGA8DPQ0D2H9 430 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 SPEM2Q0P670 501 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 C2orf27AQ580R0 203 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 RAB41Q5JT25 222 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 ERMP1Q7Z2K6 904 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 PIGZQ86VD9 579 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 ETFBKMTQ8IXQ9 262 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 PHTF2Q8N3S3 785 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 ARHGEF4Q9NR80 690 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 CLIC5Q9NZA1 410 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 DNMT3LQ9UJW3 386 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 NUDT5Q9UKK9 219 aa22.84■■□□□ 1.25
CCDC28B-201ENST00000373602 MDM4O15151 490 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 RALAP11233 206 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 TBXAS1P24557 533 aaPredicted RBP22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 SLC8A3P57103 927 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 LRMPQ12912 555 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 C10orf120Q5SQS8 335 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 BTBD8Q5XKL5 378 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 CACNA2D4Q7Z3S7 1137 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 TADA2BQ86TJ2 420 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 TTC30AQ86WT1 665 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 TMEM25Q86YD3 366 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 SFTPA1Q8IWL2 248 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 DLL3Q9NYJ7 618 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 LSM7Q9UK45 103 aaKnown RBP22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 MMP17Q9ULZ9 603 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 CTNND2Q9UQB3 1225 aa22.83■■□□□ 1.25
CCDC28B-201ENST00000373602 CCDC192P0DO97 292 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 TNFRSF4P43489 277 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 LMNB2Q03252 620 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 KDSRQ06136 332 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 PUM1Q14671 1186 aaKnown RBP eCLIP22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 GOLGA7BQ2TAP0 167 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 ANO4Q32M45 955 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 SGO2Q562F6 1265 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 NAT16Q8N8M0 369 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 TSTD1Q8NFU3 115 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 CDK5RAP1Q96SZ6 601 aaKnown RBP22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 TSPAN16Q9UKR8 245 aa22.82■■□□□ 1.24
CCDC28B-201ENST00000373602 PRR5-ARHGAP8B1AHC4 643 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 P4HA2O15460 535 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 TULP3O75386 442 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 ARHGAP8P85298 464 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 FOXK2Q01167 660 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 PAK1Q13153 545 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 RSPO4Q2I0M5 234 aaPredicted RBP22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 HSF5Q4G112 596 aaPredicted RBP22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 KBTBD6Q86V97 674 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 ARHGAP18Q8N392 663 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 CCDC33Q8N5R6 958 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 LMO3Q8TAP4 145 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 LOXL4Q96JB6 756 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 NT5C1BQ96P26 610 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 SEMA4GQ9NTN9 838 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 DEC1Q9P2X7 70 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 KIAA1257Q9ULG3 409 aa22.81■■□□□ 1.24
CCDC28B-201ENST00000373602 CEP250Q9BV73 2442 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 EML5Q05BV3 1969 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 XPO1O14980 1071 aaKnown RBP22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 GNA14O95837 355 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 VDRP11473 427 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 CD19P15391 556 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 KIR2DL1P43626 348 aaPredicted RBP22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 BCAT1P54687 386 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 STX17P56962 302 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 UBE2HP62256 183 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 PDE4CQ08493 712 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 CETN1Q12798 172 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 CRY1Q16526 586 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 CSRP2Q16527 193 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 PREPLQ4J6C6 727 aaPredicted RBP22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 EMC10Q5UCC4 262 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 Q6ZNB5 142 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 TRIM59Q8IWR1 403 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 ALLCQ8N6M5 410 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 TRIML1Q8N9V2 468 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 IL17RCQ8NAC3 791 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 ZC3H10Q96K80 434 aaKnown RBP22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 MARK1Q9P0L2 795 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 HESX1Q9UBX0 185 aa22.8■■□□□ 1.24
CCDC28B-201ENST00000373602 TULP2O00295 520 aa22.79■■□□□ 1.24
CCDC28B-201ENST00000373602 O00370 1275 aa22.79■■□□□ 1.24
CCDC28B-201ENST00000373602 STC2O76061 302 aa22.79■■□□□ 1.24
CCDC28B-201ENST00000373602 TIE1P35590 1138 aa22.79■■□□□ 1.24
CCDC28B-201ENST00000373602 TKTL1P51854 596 aa22.79■■□□□ 1.24
CCDC28B-201ENST00000373602 DGKEP52429 567 aa22.79■■□□□ 1.24
CCDC28B-201ENST00000373602 MARSP56192 900 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms