RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 VWA3BQ502W6 1294 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 TCP11X2Q5H9J9 407 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 PLA2G2CQ5R387 149 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 CDKAL1Q5VV42 579 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 CC2D1AQ6P1N0 951 aaPredicted RBP16■□□□□ 0.15
SS18L1-202ENST00000370848 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 TMEM270Q6UE05 265 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 NUP93Q8N1F7 819 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 CSNK1G1Q9HCP0 422 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 FANCLQ9NW38 375 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 EHD2Q9NZN4 543 aa16■□□□□ 0.15
SS18L1-202ENST00000370848 CHD8Q9HCK8 2581 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 TM4SF5O14894 197 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 RPP40O75818 363 aaKnown RBP15.99■□□□□ 0.15
SS18L1-202ENST00000370848 CKMP06732 381 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 ZNF806P0C7X5 589 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 CHRM1P11229 460 aaPredicted RBP15.99■□□□□ 0.15
SS18L1-202ENST00000370848 CD19P15391 556 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 PGFP49763 221 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
SS18L1-202ENST00000370848 SLC7A9P82251 487 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 ZXDBP98169 803 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 GCNT1Q02742 428 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 NCAPHQ15003 741 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 GOLGA7BQ2TAP0 167 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 GAB4Q2WGN9 574 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 ANO6Q4KMQ2 910 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 ARHGAP17Q68EM7 881 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 GBP6Q6ZN66 633 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 CACNA2D4Q7Z3S7 1137 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 TTC30AQ86WT1 665 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 TTC39CQ8N584 583 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 RBBP8NLQ8NC74 664 aaPredicted RBP15.99■□□□□ 0.15
SS18L1-202ENST00000370848 TFAP2BQ92481 460 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 FBXO32Q969P5 355 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 CYP2S1Q96SQ9 504 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 NDST4Q9H3R1 872 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 SIX2Q9NPC8 291 aa15.99■□□□□ 0.15
SS18L1-202ENST00000370848 UBE2TQ9NPD8 197 aaPredicted RBP15.99■□□□□ 0.15
SS18L1-202ENST00000370848 DUS2Q9NX74 493 aaKnown RBP15.99■□□□□ 0.15
SS18L1-202ENST00000370848 SYCE3A1L190 88 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 ZNF840PA6NDX5 716 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 TULP2O00295 520 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 OAS1P00973 400 aaKnown RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 TRIM21P19474 475 aaKnown RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 BRD2P25440 801 aaKnown RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 PON1P27169 355 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 YWHAQP27348 245 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 MYL5Q02045 173 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 KRT31Q15323 416 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 EXOC3L4Q17RC7 722 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 NAIF1Q69YI7 327 aaPredicted RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 HEATR6Q6AI08 1181 aaKnown RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 DPY19L2P1Q6NXN4 242 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 ARL14EPQ8N8R7 260 aaPredicted RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 CCDC26Q8TAB7 109 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 SH3RF2Q8TEC5 729 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 DDX1Q92499 740 aaKnown RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 CD101Q93033 1021 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 ACDQ96AP0 544 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 FUCA2Q9BTY2 467 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 DUSP16Q9BY84 665 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 HSD3B7Q9H2F3 369 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 FAM124BQ9H5Z6 455 aaPredicted RBP15.98■□□□□ 0.15
SS18L1-202ENST00000370848 TRPM5Q9NZQ8 1165 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 GMIPQ9P107 970 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 TSPAN16Q9UKR8 245 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 SLC8A2Q9UPR5 921 aa15.98■□□□□ 0.15
SS18L1-202ENST00000370848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 O00370 1275 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 PES1O00541 588 aaKnown RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 RTN3O95197 1032 aaPredicted RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 ABL1P00519 1130 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 HDCP19113 662 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 EEF1GP26641 437 aaKnown RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 OPRD1P41143 372 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 EIF2DP41214 584 aaKnown RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 IFNAR2P48551 515 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 ZNF132P52740 706 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 KCNMA1Q12791 1236 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 SGO2Q562F6 1265 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 CEP68Q76N32 757 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 VPS16Q9H269 839 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 ACP6Q9NPH0 428 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 IL37Q9NZH6 218 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 CHORDC1Q9UHD1 332 aaPredicted RBP15.97■□□□□ 0.15
SS18L1-202ENST00000370848 WNT6Q9Y6F9 365 aa15.97■□□□□ 0.15
SS18L1-202ENST00000370848 PLXND1Q9Y4D7 1925 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 FAM92AA1XBS5 289 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 DCDC2BA2VCK2 349 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 BECN2A8MW95 431 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 CYP26A1O43174 497 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 NFATC1O95644 943 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 PNMA6AP0CW24 399 aaPredicted RBP15.96■□□□□ 0.15
SS18L1-202ENST00000370848 VDRP11473 427 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 KRT5P13647 590 aa15.96■□□□□ 0.15
SS18L1-202ENST00000370848 KLK7P49862 253 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms