RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 NUP188Q5SRE5 1749 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 SNX2O60749 519 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 SLC6A3Q01959 620 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 E2F5Q15329 346 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 FUT10Q6P4F1 479 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 TFB1MQ8WVM0 346 aaKnown RBP13.11□□□□□ -0.31
USP33-204ENST00000370794 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
USP33-204ENST00000370794 REXO2Q9Y3B8 237 aaKnown RBP13.11□□□□□ -0.31
USP33-204ENST00000370794 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 STX7O15400 261 aaKnown RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 AARSP49588 968 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP33-204ENST00000370794 DDR2Q16832 855 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 TRIM42Q8IWZ5 723 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 PDZD8Q8NEN9 1154 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 TSPAN18Q96SJ8 248 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP33-204ENST00000370794 FAM50BQ9Y247 325 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 DERAQ9Y315 318 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 SLC9A3R1O14745 358 aaPredicted RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 RAMP2O60895 175 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 NDUFS3O75489 264 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 EOMESO95936 686 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 CORO7P57737 925 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 ADCY2Q08462 1091 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 KLHL38Q2WGJ6 581 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 TMEM63BQ5T3F8 832 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 APTXQ7Z2E3 356 aaKnown RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 ATXN7L3BQ96GX2 97 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 ZSWIM1Q9BR11 485 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 DHX15O43143 795 aaKnown RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 JCHAINP01591 159 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 OR1E1P30953 314 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 DENND1BQ6P3S1 775 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 SMG7Q92540 1137 aaKnown RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
USP33-204ENST00000370794 VCPIP1Q96JH7 1222 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 EPN3Q9H201 632 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 ATP13A1Q9HD20 1204 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
USP33-204ENST00000370794 TBC1D3BA6NDS4 549 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 MAP3K13O43283 966 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 PHF2O75151 1096 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TAC1P20366 129 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 GABRR2P28476 465 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TUBP50607 506 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 SNCBQ16143 134 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 NAPEPLDQ6IQ20 393 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 PHLDB3Q6NSJ2 640 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 LRIG3Q6UXM1 1119 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ANKRD52Q8NB46 1076 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ISCUQ9H1K1 167 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 HACD3Q9P035 362 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 COPEO14579 308 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ZNF197O14709 1029 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TTI1O43156 1089 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ANXA9O76027 345 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 CALCAP01258 141 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TRIM32Q13049 653 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 CACUL1Q86Y37 369 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
USP33-204ENST00000370794 NUP93Q8N1F7 819 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ULK4Q96C45 1275 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 CELF6Q96J87 481 aaKnown RBP13.09□□□□□ -0.31
USP33-204ENST00000370794 MFSD14AQ96MC6 490 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
USP33-204ENST00000370794 PDE2AO00408 941 aaPredicted RBP13.09□□□□□ -0.31
USP33-204ENST00000370794 CLDN5O00501 218 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 SUN1O94901 812 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 LSP1P33241 339 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms