RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 ZNF560Q96MR9 790 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 SEZ6LQ9BYH1 1024 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 PUS7LQ9H0K6 701 aaKnown RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 KRT87PA6NCN2 255 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 GSTA4O15217 222 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 TOP3BO95985 862 aaKnown RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 YES1P07947 543 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 F8A1P23610 371 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 KCNJ1P48048 391 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 RRP1BQ14684 758 aaKnown RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 POLD3Q15054 466 aaPredicted RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 Q6ZNX1 250 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 TMC7Q7Z402 723 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 SLCO6A1Q86UG4 719 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 CCDC60Q8IWA6 550 aaPredicted RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 SFRP1Q8N474 314 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 ZSCAN10Q96SZ4 725 aaPredicted RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 ELOVL6Q9H5J4 265 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 DCDC2Q9UHG0 476 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 SLC24A2Q9UI40 661 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 MRPS7Q9Y2R9 242 aaKnown RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 NCAM2O15394 837 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 FBXO21O94952 628 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 ARHGDIAP52565 204 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 NME3Q13232 169 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 TTBK2Q6IQ55 1244 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 ZNF572Q7Z3I7 529 aaPredicted RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 FOXP4Q8IVH2 680 aaPredicted RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
PRDM1-201ENST00000369089 SLC35G2Q8TBE7 412 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 ANKRD49Q8WVL7 239 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 PCDHA12Q9UN75 941 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
PRDM1-201ENST00000369089 GOLGA8SH3BPF8 625 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ZBTB5O15062 677 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RNASEH1O60930 286 aaKnown RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 AMPD1P23109 780 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 STT3AP46977 705 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 GALCP54803 685 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 GNA12Q03113 381 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 UBE3AQ05086 875 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 TCP10Q12799 353 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 BNIP3Q12983 259 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ZBED5Q49AG3 693 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 PAGE2BQ5JRK9 111 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 DCDC5Q6ZRR9 648 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 PDSS2Q86YH6 399 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 DHRSXQ8N5I4 330 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 OR8H1Q8NGG4 311 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 DEPDC1BQ8WUY9 529 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 LARP4BQ92615 738 aaKnown RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 PMEPA1Q969W9 287 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 PDCD10Q9BUL8 212 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 MLPHQ9BV36 600 aaPredicted RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 GLT8D2Q9H1C3 349 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 LIN28AQ9H9Z2 209 aaKnown RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 EFCAB1Q9HAE3 211 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 POLR1AO95602 1720 aaPredicted RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 MED23Q9ULK4 1368 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 C12orf71A8MTZ7 269 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 SH2B2O14492 632 aaPredicted RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 H6PDO95479 791 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 FAM163BP0C2L3 166 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RAP1GAPP47736 663 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 HSD17B4P51659 736 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ACTR3P61158 418 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 SLC25A3Q00325 362 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 TAF5Q15542 800 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 CALCRLQ16602 461 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RABL6Q3YEC7 729 aaPredicted RBP10.74□□□□□ -0.69
PRDM1-201ENST00000369089 LDLRAP1Q5SW96 308 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ABRAXAS1Q6UWZ7 409 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 XKR5Q6UX68 686 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 NECAB2Q7Z6G3 386 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ARMC8Q8IUR7 673 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 SYNE4Q8N205 404 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ENKURQ8TC29 256 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 FIG4Q92562 907 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RORBQ92753 470 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 KLHL31Q9H511 634 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 GCNT3O95395 438 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 APOA4P06727 396 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 CDH1P12830 882 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 BGNP21810 368 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RBL1P28749 1068 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 GP5P40197 560 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RAD51Q06609 339 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 PTPAQ15257 358 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 SPDYAQ5MJ70 313 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 KLHL17Q6TDP4 642 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 RAPH1Q70E73 1250 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 KYQ8NBH2 561 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 PIK3R3Q92569 461 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 SPATA2Q9UM82 520 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms