RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SH3BP5LQ7L8J4 393 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 FDXACB1Q9BRP7 624 aaPredicted RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 FBXO10Q9UK96 956 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 RNASEH1O60930 286 aaKnown RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 URODP06132 367 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 ACOX1Q15067 660 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 TTLL9Q3SXZ7 439 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 HDDC2Q7Z4H3 204 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 PPP1R10Q96QC0 940 aaKnown RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 HDHD2Q9H0R4 259 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 KLHL1Q9NR64 748 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 NUDT5Q9UKK9 219 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 KIRREL3Q8IZU9 778 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 UTP15Q8TED0 518 aaKnown RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNX27-202ENST00000368841 ISCUQ9H1K1 167 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 CCT8L1PA6NM43 557 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 FDFT1P37268 417 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 BOP1Q14137 746 aaKnown RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 ATP6AP1LQ52LC2 224 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 TMEM120AQ9BXJ8 343 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 JCHAINP01591 159 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 ENO2P09104 434 aaPredicted RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 AQP5P55064 265 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 MYL6P60660 151 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 PDPK2PQ6A1A2 396 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 OPTNQ96CV9 577 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 RMND5AQ9H871 391 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 C10orf88Q9H8K7 445 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 SPACA6W5XKT8 324 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 MRNIPQ6NTE8 343 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 AP4E1Q9UPM8 1137 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 CALCAP01258 141 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 RPA1P27694 616 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 SARSP49591 514 aaKnown RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 CYLC2Q14093 348 aaPredicted RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 ANKRD13AQ8IZ07 590 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 PDGFDQ9GZP0 370 aaPredicted RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 MIEF1Q9NQG6 463 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 UBQLN1Q9UMX0 589 aaKnown RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 CLTCL1P53675 1640 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 CCDC130P13994 396 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 TKTL1P51854 596 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 ERVK-24P63145 666 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 KCNMA1Q12791 1236 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 SLC13A5Q86YT5 568 aaPredicted RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 SH3GL2Q99962 352 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 DDX43Q9NXZ2 648 aaKnown RBP18.7■□□□□ 0.58
SNX27-202ENST00000368841 KLHL20Q9Y2M5 609 aa18.7■□□□□ 0.58
SNX27-202ENST00000368841 WDR27A2RRH5 827 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 FAM47E-STBD1D6RA91 191 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 MPZL3Q6UWV2 235 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 COLGALT1Q8NBJ5 622 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 SGSM3Q96HU1 749 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 PDGFCQ9NRA1 345 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 TRIM43BA6NCK2 446 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 GTF2A2P52657 109 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 MTSS1LQ765P7 747 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 PLEKHH3Q7Z736 793 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 EPHB3P54753 998 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 MMRN1Q13201 1228 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 CAMKK1Q8N5S9 505 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 TRAPPC12Q8WVT3 735 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.69■□□□□ 0.58
SNX27-202ENST00000368841 ENTPD3O75355 529 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 KLRC2P26717 231 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 DEFA1P59665 94 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 DEFA3P59666 94 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 CSTF3Q12996 717 aaKnown RBP18.69■□□□□ 0.58
SNX27-202ENST00000368841 TFDP3Q5H9I0 405 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 ZSWIM1Q9BR11 485 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 TRIM8Q9BZR9 551 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 GPAMQ9HCL2 828 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 CYP39A1Q9NYL5 469 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 GJB6O95452 261 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 ICAM1P05362 532 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 SBK1Q52WX2 424 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 RIPOR1Q6ZS17 1223 aa18.69■□□□□ 0.58
SNX27-202ENST00000368841 SSU72P8A0A1W2PR75 194 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 LRRIQ3A6PVS8 624 aaPredicted RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 MSH3P20585 1137 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 PNPLA4P41247 253 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 NPTX2P47972 431 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 TRIM71Q2Q1W2 868 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 AKIRIN2Q53H80 203 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 HHIPL2Q6UWX4 724 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 MTDHQ86UE4 582 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 IL25Q9H293 177 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 VCLP18206 1134 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 STIP1P31948 543 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 VAC14Q08AM6 782 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 PTGISQ16647 500 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 DCDC2Q9UHG0 476 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 CYP11B1P15538 503 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 CYP2F1P24903 491 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 CRYMQ14894 314 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms