RNA–Protein interactions for RNA: ENST00000368563.6

TUBGCP2-203, Transcript of tubulin gamma complex associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-203ENST00000368563 SMARCD1Q96GM5 515 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 ROPN1BQ9BZX4 212 aaPredicted RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 TASP1Q9H6P5 420 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 ROPN1Q9HAT0 212 aaPredicted RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 XAB2Q9HCS7 855 aaKnown RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 ZNF446Q9NWS9 450 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 DSEQ9UL01 958 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 SMG5Q9UPR3 1016 aaKnown RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 SIGLEC16A6NMB1 481 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 H0Y626 953 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 FBXO21O94952 628 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 LTFP02788 710 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 URODP06132 367 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 CDH18Q13634 790 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 NAPEPLDQ6IQ20 393 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 ATP6V0D2Q8N8Y2 350 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 NUF2Q9BZD4 464 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 KCND1Q9NSA2 647 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 ARHGEF38Q9NXL2 777 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 LRG1P02750 347 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 MBL2P11226 248 aaPredicted RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 GEMIN4P57678 1058 aaKnown RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 COLGALT1Q8NBJ5 622 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 CPSF2Q9P2I0 782 aaKnown RBP16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 IPPQ9Y573 584 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 PCDHA2Q9Y5H9 948 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 CYP1A2P05177 515 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 KDELR1P24390 212 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 ELK3P41970 407 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 CPXM1Q96SM3 734 aa16.34■□□□□ 0.21
TUBGCP2-203ENST00000368563 RBM22Q9NW64 420 aaKnown RBP eCLIP16.34■□□□□ 0.215e-6■■■■■ 31.7
TUBGCP2-203ENST00000368563 MAP1BP46821 2468 aaKnown RBP16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 SLC11A2P49281 568 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 TMC3Q7Z5M5 1100 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 GBP7Q8N8V2 638 aaPredicted RBP16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 NDRG1Q92597 394 aaKnown RBP16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 CCDC124Q96CT7 223 aaKnown RBP16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 ELMO2Q96JJ3 720 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 ST6GALNAC4Q9H4F1 302 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 TELO2Q9Y4R8 837 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 PCDHB5Q9Y5E4 795 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.21
TUBGCP2-203ENST00000368563 STK25O00506 426 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 MTSS1O43312 755 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 CCR1P32246 355 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 GRM5P41594 1212 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 ITGA7Q13683 1181 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 GPR152Q8TDT2 470 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 NTPCRQ9BSD7 190 aaKnown RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 TSSK1BQ9BXA7 367 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 NT5MQ9NPB1 228 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 CHEK2O96017 543 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 SLC2A3P11169 496 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.26e-10■■□□□ 13.6
TUBGCP2-203ENST00000368563 SPRP35270 261 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 RPL10AP62906 217 aaKnown RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 KDSRQ06136 332 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 ZNF177Q13360 481 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 MORF4L2Q15014 288 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 SGSM3Q96HU1 749 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 SHCBP1LQ9BZQ2 653 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 TKTL2Q9H0I9 626 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 PDZD7Q9H5P4 517 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 MINDY3Q9H8M7 445 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 ACTR5Q9H9F9 607 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 APOBEC3GQ9HC16 384 aaKnown RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 PCDH9Q9HC56 1237 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 FARP1Q9Y4F1 1045 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP2-203ENST00000368563 DNAJC6O75061 913 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 NPR3P17342 541 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 CSE1LP55060 971 aaKnown RBP16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 IFI35P80217 286 aaPredicted RBP16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 TSHZ1Q6ZSZ6 1077 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 ULK4Q96C45 1275 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 UNKQ9C0B0 810 aaKnown RBP16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 SLC30A1Q9Y6M5 507 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 F5H5T6 163 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 B4GALT4O60513 344 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 NDUFS3O75489 264 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 STX3Q13277 289 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 CRHR2Q13324 411 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 CAPNS2Q96L46 248 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 DDX50Q9BQ39 737 aaKnown RBP16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 CBX4O00257 560 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 HOXA2O43364 376 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 TUBP50607 506 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 KCNA10Q16322 511 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 HES6Q96HZ4 224 aa16.32■□□□□ 0.2
TUBGCP2-203ENST00000368563 PAFAH2Q99487 392 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms