RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PRDM2Q13029 1718 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 GUCY1A2P33402 732 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 GSTM5P46439 218 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 IRAK1P51617 712 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM67Q6ZTA4 783 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ARL5BQ96KC2 179 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CCDC32Q9BV29 185 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 DBR1Q9UK59 544 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 GPC4O75487 556 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 UGT1A1P22309 533 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TRAF2Q12933 501 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 COLEC12Q5KU26 742 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 IPCEF1Q8WWN9 437 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 GPRASP2Q96D09 838 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CPNE2Q96FN4 548 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 LGALS13Q9UHV8 139 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHB2Q9Y5E7 798 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PTPRMP28827 1452 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 C5orf60A6NFR6 353 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 B8ZZF3 427 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 KCNA3P22001 575 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TMBIM6P55061 237 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PTENP60484 403 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 IFRD2Q12894 506 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 NAB2Q15742 525 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 IDNKQ5T6J7 187 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CENPPQ6IPU0 288 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 KDELC2Q7Z4H8 507 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SAPCD2Q86UD0 394 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 HEATR4Q86WZ0 1026 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CHERPQ8IWX8 916 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 STX4Q12846 297 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 NFX1Q12986 1120 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SUGCTQ9HAC7 445 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ING4Q9UNL4 249 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SLC12A4Q9UP95 1085 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 A0A1W2PRG6 482 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CYP19A1P11511 503 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PHKG1Q16816 387 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF554Q86TJ5 538 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TUBB1Q9H4B7 451 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SAMSN1Q9NSI8 373 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 IMP3Q9NV31 184 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 COMMD10Q9Y6G5 202 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ZBTB39O15060 712 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TGOLN2O43493 480 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 NARSO43776 548 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ITGB6P18564 788 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PSMC2P35998 433 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ALDH6A1Q02252 535 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 DDX42Q86XP3 938 aaKnown RBP eCLIP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CPNE9Q8IYJ1 553 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 DQX1Q8TE96 717 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 UCK2Q9BZX2 261 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 KLHL20Q9Y2M5 609 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 IL6P05231 212 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 EPC2Q52LR7 807 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 C19orf43Q9BQ61 176 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 FAM163BP0C2L3 166 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PDK2Q15119 407 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ARHGAP17Q68EM7 881 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ANKRD13DQ6ZTN6 518 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 RSAD2Q8WXG1 361 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SLC39A1Q9NY26 324 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SERPINB13Q9UIV8 391 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 EIF1AYO14602 144 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SNRPAP09012 282 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 EIF1AXP47813 144 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 KLHDC8BQ8IXV7 354 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 DNAAF3Q8N9W5 541 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 C9orf43Q8TAL5 461 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 UGT2B28Q9BY64 529 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 RBM8AQ9Y5S9 174 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF423Q2M1K9 1284 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ANO7Q6IWH7 933 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM65Q6PJ69 517 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 MARVELD3Q96A59 401 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 OR2B2Q9GZK3 357 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PRDM5Q9NQX1 630 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 QSOX1O00391 747 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ALADP13716 330 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 GEMIN4P57678 1058 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ME3Q16798 604 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM71Q2Q1W2 868 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 NUP50Q9UKX7 468 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 EYA2O00167 538 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 HNRNPH1P31943 449 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 KRT31Q15323 416 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 MZT2AQ6P582 158 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 C12orf50Q8NA57 414 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 WDR70Q9NW82 654 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 VPS28Q9UK41 221 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 GPIP06744 558 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ADRA2BP18089 450 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 FAM26FQ5R3K3 315 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 DCUN1D2Q6PH85 259 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 C14orf105Q9NVL8 296 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ITGA11Q9UKX5 1188 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms