RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 PNPLA4P41247 253 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CDH8P55286 799 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 POLR2FP61218 127 aaKnown RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 TNNC1P63316 161 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CETN1Q12798 172 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 MYO1EQ12965 1108 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 PLD1Q13393 1074 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 ORC1Q13415 861 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CUL2Q13617 745 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 ELF2Q15723 593 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 SOWAHAQ2M3V2 549 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 SGSM1Q2NKQ1 1148 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 MGAT5BQ3V5L5 792 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 SV2CQ496J9 727 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 ZNF667Q5HYK9 610 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 GPR158Q5T848 1215 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 SDHAF4Q5VUM1 108 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 E4F1Q66K89 784 aaPredicted RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 NAIF1Q69YI7 327 aaPredicted RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 TENM4Q6N022 2769 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 OSTM1Q86WC4 334 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 PPM1KQ8N3J5 372 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 PDCL2Q8N4E4 241 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 UBR7Q8N806 425 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 KBTBD7Q8WVZ9 684 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 TWNKQ96RR1 684 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 PKMYT1Q99640 499 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 MRPL45Q9BRJ2 306 aaKnown RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 NAA15Q9BXJ9 866 aaKnown RBP8.67□□□□□ -1.02
MRPL55-211ENST00000366738 IMPG2Q9BZV3 1241 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 NLRC4Q9NPP4 1024 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 PLCB1Q9NQ66 1216 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 HSFX1Q9UBD0 423 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 DNAJC12Q9UKB3 198 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 CCL26Q9Y258 94 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 INVSQ9Y283 1065 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 NEUROG3Q9Y4Z2 214 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 ASB3Q9Y575 518 aa8.67□□□□□ -1.02
MRPL55-211ENST00000366738 SPAARA0A1B0GVQ0 90 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 F8VZ95 297 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TADA3O75528 432 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 RHOBTB1O94844 696 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 CALCAP01258 141 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 F11P03951 625 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TPM3P06753 285 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 HAPLN1P10915 354 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 CD58P19256 250 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TRIM21P19474 475 aaKnown RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 ACO1P21399 889 aaKnown RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 CDC25BP30305 580 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 GBP1P32455 592 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 JAM2P57087 298 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 GCNT1Q02742 428 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 ARHGAP44Q17R89 818 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 ITPRIPL2Q3MIP1 535 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TMEM196Q5HYL7 178 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 SPECC1LQ69YQ0 1117 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TRIM68Q6AZZ1 485 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 LIMS2Q7Z4I7 341 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 SPC24Q8NBT2 197 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 CCDC150Q8NCX0 1101 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 NEK11Q8NG66 645 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 BAP1Q92560 729 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TAF4BQ92750 862 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 MMS19Q96T76 1030 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 TASP1Q9H6P5 420 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 FBRSL1Q9HCM7 1045 aaKnown RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 UBE2TQ9NPD8 197 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 HPS4Q9NQG7 708 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 GDAP2Q9NXN4 497 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 ABI2Q9NYB9 513 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 R3HCC1Q9Y3T6 440 aaKnown RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-211ENST00000366738 ASXL3Q9C0F0 2248 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 THADAQ6YHU6 1953 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 DENND4CQ5VZ89 1909 aa8.66□□□□□ -1.02
MRPL55-211ENST00000366738 LRRC53A6NM62 1247 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 KHNYNO15037 678 aaKnown RBP8.65□□□□□ -1.02
MRPL55-211ENST00000366738 ATG13O75143 517 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 BCKDHBP21953 392 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 PAX3P23760 479 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 ACAT1P24752 427 aaKnown RBP8.65□□□□□ -1.02
MRPL55-211ENST00000366738 WEE1P30291 646 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 CASP14P31944 242 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 TUFMP49411 452 aaKnown RBP8.65□□□□□ -1.02
MRPL55-211ENST00000366738 IRX4P78413 519 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 GRSF1Q12849 480 aaKnown RBP eCLIP8.65□□□□□ -1.02
MRPL55-211ENST00000366738 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.02
MRPL55-211ENST00000366738 DRAP1Q14919 205 aaPredicted RBP8.65□□□□□ -1.02
MRPL55-211ENST00000366738 ZNF394Q53GI3 561 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 TXNDC8Q6A555 127 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 PDZD3Q86UT5 571 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 ITIH5Q86UX2 942 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 ADGRF2Q8IZF7 708 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 CMTM8Q8IZV2 173 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 CAMKK1Q8N5S9 505 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 TOP6BLQ8N6T0 577 aa8.65□□□□□ -1.02
MRPL55-211ENST00000366738 RPLP0P6Q8NHW5 317 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms